Cluster: CGMR091553_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR091553
- CGC Family ID: CGCFAM_01910
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13880 | k141_13880_1 | 3 | 1325 | - | 2.A.26.1.1 |
| TC | k141_13880 | k141_13880_2 | 1456 | 2445 | - | 3.A.1.5.20 |
| TC | k141_13880 | k141_13880_3 | 2449 | 3438 | - | 3.A.1.5.12 |
| TC | k141_13880 | k141_13880_4 | 3448 | 4344 | - | 3.A.1.5.11 |
| TC | k141_13880 | k141_13880_5 | 4354 | 5274 | - | 3.A.1.5.11 |
| TC | k141_13880 | k141_13880_6 | 5389 | 7098 | - | 3.A.1.5.11 |
| CAZyme | k141_13880 | k141_13880_7 | 7364 | 8695 | + | GH29 |
Gene ID: k141_13880_1
Type: TC
Location: 3 - 1325 (-)
Type: TC
Location: 3 - 1325 (-)
Gene ID: k141_13880_2
Type: TC
Location: 1456 - 2445 (-)
Type: TC
Location: 1456 - 2445 (-)
Gene ID: k141_13880_3
Type: TC
Location: 2449 - 3438 (-)
Type: TC
Location: 2449 - 3438 (-)
Gene ID: k141_13880_4
Type: TC
Location: 3448 - 4344 (-)
Type: TC
Location: 3448 - 4344 (-)
Gene ID: k141_13880_5
Type: TC
Location: 4354 - 5274 (-)
Type: TC
Location: 4354 - 5274 (-)
Gene ID: k141_13880_6
Type: TC
Location: 5389 - 7098 (-)
Type: TC
Location: 5389 - 7098 (-)
Gene ID: k141_13880_7
Type: CAZyme
Location: 7364 - 8695 (+)
Type: CAZyme
Location: 7364 - 8695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.