Genome Details
Selected Rep_genome_ID: CGMR051204
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR051204 | 2,904,311 | 96.37% | 0% | China | Asia | CGMR |
| SPMP87_bin.52 | 3,221,831 | 92.59% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR051204_CGC9 | CGCFAM_00003 | Yes | 9 | 4 | |
| CGMR051204_CGC1 | CGCFAM_00866 | Yes | 9 | 2 | |
| CGMR051204_CGC11 | CGCFAM_01898 | Yes | 3 | 1 | |
| CGMR051204_CGC12 | CGCFAM_03833 | Yes | 3 | 1 | |
| CGMR051204_CGC3 | CGCFAM_07390 | Yes | 8 | 1 | |
| CGMR051204_CGC5 | CGCFAM_07393 | Yes | 4 | 1 | |
| CGMR051204_CGC7 | CGCFAM_07395 | Yes | 4 | 1 | |
| CGMR051204_CGC14 | CGCFAM_07396 | Yes | 9 | 2 | |
| CGMR051204_CGC13 | CGCFAM_08670 | Yes | 4 | 1 |
Top CAZyme Families