Cluster: CGMR051204_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051204
- CGC Family ID: CGCFAM_08670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_40249 | k141_40249_66 | 59624 | 59983 | + | 9.B.55.2.1 |
| pfam | k141_40249 | k141_40249_67 | 60001 | 60210 | + | Zn_ribbon_13 |
| pfam | k141_40249 | k141_40249_68 | 60207 | 60917 | - | DUF5714 |
| CAZyme | k141_40249 | k141_40249_69 | 60991 | 62121 | - | CE9 |
Gene ID: k141_40249_66
Type: TC
Location: 59624 - 59983 (+)
Type: TC
Location: 59624 - 59983 (+)
Gene ID: k141_40249_67
Type: pfam
Location: 60001 - 60210 (+)
Type: pfam
Location: 60001 - 60210 (+)
Gene ID: k141_40249_68
Type: pfam
Location: 60207 - 60917 (-)
Type: pfam
Location: 60207 - 60917 (-)
Gene ID: k141_40249_69
Type: CAZyme
Location: 60991 - 62121 (-)
Type: CAZyme
Location: 60991 - 62121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.