Cluster: CGMR051204_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051204
- CGC Family ID: CGCFAM_07390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_113735 | k141_113735_16 | 15619 | 16962 | - | 2.A.66.1.33 |
| pfam | k141_113735 | k141_113735_17 | 17025 | 17456 | - | MobB |
| pfam | k141_113735 | k141_113735_18 | 17438 | 19216 | - | MoCF_biosynth | MoeA_N | MoeA_C | NTP_transf_3 |
| TC | k141_113735 | k141_113735_19 | 19237 | 19656 | - | 5.A.3.3.2 |
| TC | k141_113735 | k141_113735_20 | 19643 | 21733 | - | 5.A.3.5.1 |
| CAZyme | k141_113735 | k141_113735_21 | 21730 | 23409 | - | GH123 |
| TC | k141_113735 | k141_113735_22 | 23445 | 24281 | - | 3.A.1.1.36 |
| TC | k141_113735 | k141_113735_23 | 24278 | 25222 | - | 3.A.1.1.3 |
Gene ID: k141_113735_16
Type: TC
Location: 15619 - 16962 (-)
Type: TC
Location: 15619 - 16962 (-)
Gene ID: k141_113735_17
Type: pfam
Location: 17025 - 17456 (-)
Type: pfam
Location: 17025 - 17456 (-)
Gene ID: k141_113735_18
Type: pfam
Location: 17438 - 19216 (-)
Type: pfam
Location: 17438 - 19216 (-)
Gene ID: k141_113735_19
Type: TC
Location: 19237 - 19656 (-)
Type: TC
Location: 19237 - 19656 (-)
Gene ID: k141_113735_20
Type: TC
Location: 19643 - 21733 (-)
Type: TC
Location: 19643 - 21733 (-)
Gene ID: k141_113735_21
Type: CAZyme
Location: 21730 - 23409 (-)
Type: CAZyme
Location: 21730 - 23409 (-)
Gene ID: k141_113735_22
Type: TC
Location: 23445 - 24281 (-)
Type: TC
Location: 23445 - 24281 (-)
Gene ID: k141_113735_23
Type: TC
Location: 24278 - 25222 (-)
Type: TC
Location: 24278 - 25222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.