Cluster: CGMR051204_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051204
- CGC Family ID: CGCFAM_07393
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_50204 | k141_50204_1 | 3 | 1178 | + | GH77 |
| pfam | k141_50204 | k141_50204_2 | 1226 | 1780 | - | SnoaL_4 |
| STP | k141_50204 | k141_50204_3 | 1812 | 3797 | - | Pyr_redox_2 |
| TC | k141_50204 | k141_50204_4 | 3825 | 5258 | - | 2.A.1.3.13 |
Gene ID: k141_50204_1
Type: CAZyme
Location: 3 - 1178 (+)
Type: CAZyme
Location: 3 - 1178 (+)
Gene ID: k141_50204_2
Type: pfam
Location: 1226 - 1780 (-)
Type: pfam
Location: 1226 - 1780 (-)
Gene ID: k141_50204_3
Type: STP
Location: 1812 - 3797 (-)
Type: STP
Location: 1812 - 3797 (-)
Gene ID: k141_50204_4
Type: TC
Location: 3825 - 5258 (-)
Type: TC
Location: 3825 - 5258 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.