Genome Details
Selected Rep_genome_ID: CGMR045438
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR045438 | 1,973,131 | 93.01% | 3.89% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR045438_CGC23 | CGCFAM_00001 | Yes | 6 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR045438_CGC2 | CGCFAM_00028 | Yes | 6 | 3 | |
| CGMR045438_CGC1 | CGCFAM_00062 | Yes | 10 | 2 | beta-glucan |
| CGMR045438_CGC21 | CGCFAM_00113 | Yes | 4 | 1 | |
| CGMR045438_CGC14 | CGCFAM_00844 | Yes | 4 | 1 | |
| CGMR045438_CGC11 | CGCFAM_01015 | Yes | 3 | 1 | |
| CGMR045438_CGC19 | CGCFAM_01757 | Yes | 3 | 1 | |
| CGMR045438_CGC9 | CGCFAM_01779 | Yes | 5 | 1 | |
| CGMR045438_CGC5 | CGCFAM_02691 | Yes | 4 | 1 | |
| CGMR045438_CGC15 | CGCFAM_02757 | Yes | 4 | 1 | |
| CGMR045438_CGC10 | CGCFAM_04577 | Yes | 4 | 2 | |
| CGMR045438_CGC22 | CGCFAM_08611 | Yes | 3 | 1 | |
| CGMR045438_CGC3 | CGCFAM_08612 | Yes | 6 | 2 |
Top CAZyme Families