Cluster: CGMR045438_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045438
- CGC Family ID: CGCFAM_01779
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1520081 | k141_1520081_6 | 4578 | 5324 | + | 1.B.42.1.2 |
| pfam | k141_1520081 | k141_1520081_7 | 5325 | 6305 | + | Kelch_1 | Kelch_1 | Kelch_3 | Kelch_4 | Kelch_HCF | Kelch_6 | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7 |
| TC | k141_1520081 | k141_1520081_8 | 6334 | 7773 | + | 1.B.73.2.2 |
| pfam | k141_1520081 | k141_1520081_9 | 7767 | 8486 | + | Glycos_transf_2 | Glyco_transf_21 |
| CAZyme | k141_1520081 | k141_1520081_10 | 8483 | 9907 | + | GT2 |
Gene ID: k141_1520081_6
Type: TC
Location: 4578 - 5324 (+)
Type: TC
Location: 4578 - 5324 (+)
Gene ID: k141_1520081_7
Type: pfam
Location: 5325 - 6305 (+)
Type: pfam
Location: 5325 - 6305 (+)
Gene ID: k141_1520081_8
Type: TC
Location: 6334 - 7773 (+)
Type: TC
Location: 6334 - 7773 (+)
Gene ID: k141_1520081_9
Type: pfam
Location: 7767 - 8486 (+)
Type: pfam
Location: 7767 - 8486 (+)
Gene ID: k141_1520081_10
Type: CAZyme
Location: 8483 - 9907 (+)
Type: CAZyme
Location: 8483 - 9907 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.