Genome Details
Selected Rep_genome_ID: CGMR035693
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_V
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR012688 | 1,882,077 | 99.3% | 0.77% | China | Asia | CGMR |
| CGMR035693 | 1,993,980 | 98.22% | 0.42% | China | Asia | CGMR |
| CGMR043773 | 1,925,737 | 97.38% | 2.23% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR035693_CGC7 | CGCFAM_00029 | Yes | 4 | 1 | |
| CGMR035693_CGC18 | CGCFAM_00701 | Yes | 9 | 1 | |
| CGMR035693_CGC4 | CGCFAM_00702 | Yes | 9 | 3 | |
| CGMR035693_CGC21 | CGCFAM_00908 | Yes | 7 | 1 | |
| CGMR035693_CGC22 | CGCFAM_01610 | Yes | 5 | 1 | |
| CGMR035693_CGC9 | CGCFAM_03482 | Yes | 7 | 1 | |
| CGMR035693_CGC16 | CGCFAM_05193 | Yes | 3 | 1 |
Top CAZyme Families