Cluster: CGMR035693_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035693
- CGC Family ID: CGCFAM_01610
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_11931 | k141_11931_134 | 134884 | 136158 | - | 2.A.1.25.3 |
| pfam | k141_11931 | k141_11931_135 | 136239 | 137255 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | GDP_Man_Dehyd |
| TC | k141_11931 | k141_11931_136 | 137460 | 140684 | + | 1.B.12.5.3 |
| NULL(UNKNOWN) | k141_11931 | k141_11931_137 | 140862 | 141335 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_11931 | k141_11931_138 | 141626 | 142453 | - | CE1 |
Gene ID: k141_11931_134
Type: TC
Location: 134884 - 136158 (-)
Type: TC
Location: 134884 - 136158 (-)
Gene ID: k141_11931_135
Type: pfam
Location: 136239 - 137255 (-)
Type: pfam
Location: 136239 - 137255 (-)
Gene ID: k141_11931_136
Type: TC
Location: 137460 - 140684 (+)
Type: TC
Location: 137460 - 140684 (+)
Gene ID: k141_11931_137
Type:
Location: 140862 - 141335 (-)
Type:
Location: 140862 - 141335 (-)
Gene ID: k141_11931_138
Type: CAZyme
Location: 141626 - 142453 (-)
Type: CAZyme
Location: 141626 - 142453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905215245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.