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Cluster: CGMR035693_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11931 k141_11931_41 40656 41537 + 3.A.1.15.4
TC k141_11931 k141_11931_42 41537 42433 + 3.A.1.15.4
TC k141_11931 k141_11931_43 42437 43288 + 3.A.1.15.4
TC k141_11931 k141_11931_44 43281 44114 + 3.A.1.15.4
TC k141_11931 k141_11931_45 44371 46632 - 3.A.1.33.1
pfam k141_11931 k141_11931_46 46659 47828 - MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
CAZyme k141_11931 k141_11931_47 47825 48871 - GH3
Gene ID: k141_11931_41
Type: TC
Location: 40656 - 41537 (+)
Gene ID: k141_11931_42
Type: TC
Location: 41537 - 42433 (+)
Gene ID: k141_11931_43
Type: TC
Location: 42437 - 43288 (+)
Gene ID: k141_11931_44
Type: TC
Location: 43281 - 44114 (+)
Gene ID: k141_11931_45
Type: TC
Location: 44371 - 46632 (-)
Gene ID: k141_11931_46
Type: pfam
Location: 46659 - 47828 (-)
Gene ID: k141_11931_47
Type: CAZyme
Location: 47825 - 48871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_11931_43 vegan > omnivore 2.23224 0.01144
k141_11931_43 vegetarian > omnivore 1.19472 0.01077
k141_11931_44 vegan > omnivore 2.06343 0.01144
k141_11931_44 vegetarian > omnivore 1.37009 0.01077
k141_11931_46 vegan > omnivore 1.12531 0.01144
k141_11931_46 vegetarian > omnivore 1.09395 0.01077

🧭 Explore Read Mapping of CGC

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