Genome Details
Selected Rep_genome_ID: BF109_134_sub
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus flavefaciens_E
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF109_134_sub | 3,591,137 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| BF109_134_sub_CGC27 | CGCFAM_00022 | Yes | 3 | 1 | |
| BF109_134_sub_CGC20 | CGCFAM_00060 | Yes | 3 | 1 | |
| BF109_134_sub_CGC5 | CGCFAM_00281 | Yes | 11 | 5 | |
| BF109_134_sub_CGC6 | CGCFAM_00317 | Yes | 14 | 2 | |
| BF109_134_sub_CGC17 | CGCFAM_00417 | Yes | 3 | 1 | |
| BF109_134_sub_CGC10 | CGCFAM_00766 | Yes | 3 | 1 | |
| BF109_134_sub_CGC14 | CGCFAM_00943 | Yes | 4 | 2 | |
| BF109_134_sub_CGC33 | CGCFAM_01591 | Yes | 6 | 1 | |
| BF109_134_sub_CGC16 | CGCFAM_01808 | Yes | 3 | 2 | beta-glucan |
| BF109_134_sub_CGC2 | CGCFAM_01932 | Yes | 4 | 2 | |
| BF109_134_sub_CGC11 | CGCFAM_02661 | Yes | 8 | 2 | |
| BF109_134_sub_CGC28 | CGCFAM_02661 | Yes | 6 | 3 | |
| BF109_134_sub_CGC15 | CGCFAM_03522 | Yes | 8 | 2 | |
| BF109_134_sub_CGC19 | CGCFAM_04918 | Yes | 5 | 2 | |
| BF109_134_sub_CGC1 | CGCFAM_05065 | Yes | 4 | 1 | |
| BF109_134_sub_CGC13 | CGCFAM_05066 | Yes | 4 | 1 | |
| BF109_134_sub_CGC22 | CGCFAM_05067 | Yes | 7 | 3 | |
| BF109_134_sub_CGC8 | CGCFAM_06856 | Yes | 4 | 2 | |
| BF109_134_sub_CGC12 | CGCFAM_07682 | Yes | 3 | 1 | |
| BF109_134_sub_CGC24 | CGCFAM_07683 | Yes | 13 | 1 | |
| BF109_134_sub_CGC26 | CGCFAM_07684 | Yes | 4 | 1 | |
| BF109_134_sub_CGC4 | CGCFAM_07685 | Yes | 6 | 2 |
Top CAZyme Families