Cluster: BF109_134_sub_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: BF109_134_sub
- CGC Family ID: CGCFAM_02661
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_360097 | k141_360097_63 | 80865 | 83864 | + | 3.A.1.122.2 |
| CAZyme | k141_360097 | k141_360097_64 | 83980 | 86415 | - | CBM22 | CE1 | GH11 |
| CAZyme | k141_360097 | k141_360097_65 | 86932 | 89949 | + | CBM22 | CBM6 | CE1 | GH43_29 |
| TF | k141_360097 | k141_360097_66 | 90164 | 90916 | + | HTH_AraC | HTH_AraC |
| TF | k141_360097 | k141_360097_67 | 91113 | 91904 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_360097 | k141_360097_68 | 91979 | 92872 | + | GH16_21 |
Gene ID: k141_360097_63
Type: TC
Location: 80865 - 83864 (+)
Type: TC
Location: 80865 - 83864 (+)
Gene ID: k141_360097_64
Type: CAZyme
Location: 83980 - 86415 (-)
Type: CAZyme
Location: 83980 - 86415 (-)
Gene ID: k141_360097_65
Type: CAZyme
Location: 86932 - 89949 (+)
Type: CAZyme
Location: 86932 - 89949 (+)
Gene ID: k141_360097_66
Type: TF
Location: 90164 - 90916 (+)
Type: TF
Location: 90164 - 90916 (+)
Gene ID: k141_360097_67
Type: TF
Location: 91113 - 91904 (+)
Type: TF
Location: 91113 - 91904 (+)
Gene ID: k141_360097_68
Type: CAZyme
Location: 91979 - 92872 (+)
Type: CAZyme
Location: 91979 - 92872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus flavefaciens_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.