Cluster: BF109_134_sub_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: BF109_134_sub
- CGC Family ID: CGCFAM_07685
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_194571 | k141_194571_37 | 36514 | 38406 | - | 3.A.1.135.5 |
| TC | k141_194571 | k141_194571_38 | 38406 | 40139 | - | 3.A.1.135.5 |
| peptidase | k141_194571 | k141_194571_39 | 40403 | 41401 | + | G05.UPW |
| peptidase | k141_194571 | k141_194571_40 | 41585 | 42766 | - | G05.UPW |
| CAZyme | k141_194571 | k141_194571_41 | 42858 | 45164 | - | GH31_3 |
| CAZyme | k141_194571 | k141_194571_42 | 45676 | 49596 | + | CBM22 | GH10 | GH43_16 |
Gene ID: k141_194571_37
Type: TC
Location: 36514 - 38406 (-)
Type: TC
Location: 36514 - 38406 (-)
Gene ID: k141_194571_38
Type: TC
Location: 38406 - 40139 (-)
Type: TC
Location: 38406 - 40139 (-)
Gene ID: k141_194571_39
Type: peptidase
Location: 40403 - 41401 (+)
Type: peptidase
Location: 40403 - 41401 (+)
Gene ID: k141_194571_40
Type: peptidase
Location: 41585 - 42766 (-)
Type: peptidase
Location: 41585 - 42766 (-)
Gene ID: k141_194571_41
Type: CAZyme
Location: 42858 - 45164 (-)
Type: CAZyme
Location: 42858 - 45164 (-)
Gene ID: k141_194571_42
Type: CAZyme
Location: 45676 - 49596 (+)
Type: CAZyme
Location: 45676 - 49596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus flavefaciens_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.