dbCAN Logo

Genome Details

Selected Rep_genome_ID: AG404_bin.37_sub
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola cellulolyticus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG404_bin.37_sub 4,413,049 93.87% 4.01% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG404_bin.37_sub_CGC21 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG404_bin.37_sub_CGC36 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG404_bin.37_sub_CGC58 CGCFAM_00001 Yes 8 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG404_bin.37_sub_CGC30 CGCFAM_00003 Yes 7 3
AG404_bin.37_sub_CGC46 CGCFAM_00007 Yes 3 1
AG404_bin.37_sub_CGC60 CGCFAM_00017 Yes 8 3 fructan
AG404_bin.37_sub_CGC32 CGCFAM_00023 Yes 4 1
AG404_bin.37_sub_CGC47 CGCFAM_00025 Yes 10 5 pectin/alpha-glucan
AG404_bin.37_sub_CGC45 CGCFAM_00040 Yes 7 4
AG404_bin.37_sub_CGC29 CGCFAM_00043 Yes 7 3 alpha-glucan
AG404_bin.37_sub_CGC4 CGCFAM_00061 Yes 3 1
AG404_bin.37_sub_CGC39 CGCFAM_00083 Yes 7 1 beta-glucan
AG404_bin.37_sub_CGC24 CGCFAM_00095 Yes 6 2
AG404_bin.37_sub_CGC19 CGCFAM_00101 Yes 10 6 beta-glucan
AG404_bin.37_sub_CGC37 CGCFAM_00108 Yes 10 6 pectin
AG404_bin.37_sub_CGC49 CGCFAM_00151 Yes 3 2
AG404_bin.37_sub_CGC56 CGCFAM_00212 Yes 29 23 arabinogalactan/pectin
AG404_bin.37_sub_CGC27 CGCFAM_00213 Yes 3 1 beta-glucan
AG404_bin.37_sub_CGC28 CGCFAM_00229 Yes 4 1
AG404_bin.37_sub_CGC2 CGCFAM_00253 Yes 6 3
AG404_bin.37_sub_CGC55 CGCFAM_00360 Yes 6 3 host glycan
AG404_bin.37_sub_CGC14 CGCFAM_00406 Yes 7 1
AG404_bin.37_sub_CGC23 CGCFAM_00440 Yes 6 3
AG404_bin.37_sub_CGC16 CGCFAM_00577 Yes 29 15 beta-mannan/beta-glucan
AG404_bin.37_sub_CGC7 CGCFAM_00655 Yes 3 1
Top CAZyme Families