Cluster: AG404_bin.37_sub_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: AG404_bin.37_sub
- CGC Family ID: CGCFAM_00253
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_50998 | k141_50998_10 | 10067 | 11155 | - | GT4 |
| pfam | k141_50998 | k141_50998_11 | 11184 | 12440 | - | FrhB_FdhB_N | FrhB_FdhB_C | Fer4_7 | Fer4_9 | Fer4_10 |
| pfam | k141_50998 | k141_50998_12 | 12433 | 13593 | - | PS_pyruv_trans |
| CAZyme | k141_50998 | k141_50998_13 | 13606 | 14688 | - | GT4 |
| CAZyme | k141_50998 | k141_50998_14 | 14691 | 15458 | - | GT26 |
| TC | k141_50998 | k141_50998_15 | 16215 | 16814 | - | 9.B.18.1.2 |
Gene ID: k141_50998_10
Type: CAZyme
Location: 10067 - 11155 (-)
Type: CAZyme
Location: 10067 - 11155 (-)
Gene ID: k141_50998_11
Type: pfam
Location: 11184 - 12440 (-)
Type: pfam
Location: 11184 - 12440 (-)
Gene ID: k141_50998_12
Type: pfam
Location: 12433 - 13593 (-)
Type: pfam
Location: 12433 - 13593 (-)
Gene ID: k141_50998_13
Type: CAZyme
Location: 13606 - 14688 (-)
Type: CAZyme
Location: 13606 - 14688 (-)
Gene ID: k141_50998_14
Type: CAZyme
Location: 14691 - 15458 (-)
Type: CAZyme
Location: 14691 - 15458 (-)
Gene ID: k141_50998_15
Type: TC
Location: 16215 - 16814 (-)
Type: TC
Location: 16215 - 16814 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola cellulolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_50998_14 | vegetarian > omnivore | 2.05100 | 0.03430 |
| k141_50998_15 | vegetarian > vegan | 1.55652 | 0.04442 |