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Cluster: AG404_bin.37_sub_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_222802 k141_222802_5 5860 7395 - GH51_1
CAZyme k141_222802 k141_222802_6 7399 9378 - GH51_2
CAZyme k141_222802 k141_222802_7 9439 10410 - GH43_29
TF k141_222802 k141_222802_8 10590 14819 + HTH_AraC
CAZyme k141_222802 k141_222802_9 14954 15952 + GH43_5
TC k141_222802 k141_222802_10 16121 19330 + 1.B.14.6.1
pfam k141_222802 k141_222802_11 19368 21119 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_222802 k141_222802_12 21168 22931 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_222802 k141_222802_13 23006 24901 + GH43_4
CAZyme k141_222802 k141_222802_14 25460 27400 + GH97
Gene ID: k141_222802_5
Type: CAZyme
Location: 5860 - 7395 (-)
Gene ID: k141_222802_6
Type: CAZyme
Location: 7399 - 9378 (-)
Gene ID: k141_222802_7
Type: CAZyme
Location: 9439 - 10410 (-)
Gene ID: k141_222802_8
Type: TF
Location: 10590 - 14819 (+)
Gene ID: k141_222802_9
Type: CAZyme
Location: 14954 - 15952 (+)
Gene ID: k141_222802_10
Type: TC
Location: 16121 - 19330 (+)
Gene ID: k141_222802_11
Type: pfam
Location: 19368 - 21119 (+)
Gene ID: k141_222802_12
Type:
Location: 21168 - 22931 (+)
Gene ID: k141_222802_13
Type: CAZyme
Location: 23006 - 24901 (+)
Gene ID: k141_222802_14
Type: CAZyme
Location: 25460 - 27400 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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