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Genome Details

Selected Rep_genome_ID: AG261_bin.11_sub
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Lactococcus
→
Species
Lactococcus taiwanensis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG261_bin.11_sub 1,936,891 99.25% 0.87% NA Africa H3AfricaPhase2
HRGMv2_4354 1,691,244 92.05% 0% South Korea Asia HRGM
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_H_17_1555.37 1,663,745 92.55% 0% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG261_bin.11_sub_CGC1 CGCFAM_00012 Yes 5 1 host glycan/beta-glucan
AG261_bin.11_sub_CGC14 CGCFAM_00012 Yes 5 1 host glycan/beta-glucan
AG261_bin.11_sub_CGC21 CGCFAM_00099 Yes 3 1
AG261_bin.11_sub_CGC2 CGCFAM_00575 Yes 5 2 host glycan
PUL0582_AG261_bin.11_sub_C0 CGCFAM_00575 Yes 4 2 host glycan
AG261_bin.11_sub_CGC3 CGCFAM_00992 Yes 15 7
AG261_bin.11_sub_CGC5 CGCFAM_01076 Yes 3 1
AG261_bin.11_sub_CGC7 CGCFAM_01354 Yes 4 1
AG261_bin.11_sub_CGC9 CGCFAM_01822 Yes 4 1
AG261_bin.11_sub_CGC18 CGCFAM_01863 Yes 3 1
AG261_bin.11_sub_CGC25 CGCFAM_01997 Yes 6 1
AG261_bin.11_sub_CGC10 CGCFAM_02002 Yes 3 1
AG261_bin.11_sub_CGC24 CGCFAM_03243 Yes 8 1
AG261_bin.11_sub_CGC22 CGCFAM_04179 Yes 8 4
AG261_bin.11_sub_CGC23 CGCFAM_04517 Yes 17 4
AG261_bin.11_sub_CGC11 CGCFAM_04651 Yes 9 4
AG261_bin.11_sub_CGC8 CGCFAM_06504 Yes 4 1
AG261_bin.11_sub_CGC12 CGCFAM_07072 Yes 5 1
AG261_bin.11_sub_CGC15 CGCFAM_07073 Yes 4 1
AG261_bin.11_sub_CGC16 CGCFAM_07074 Yes 5 2
AG261_bin.11_sub_CGC4 CGCFAM_07076 Yes 3 1
AG261_bin.11_sub_CGC6 CGCFAM_07077 Yes 7 1
Top CAZyme Families