Cluster: AG261_bin.11_sub_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: AG261_bin.11_sub
- CGC Family ID: CGCFAM_00992
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_144634 | k141_144634_50 | 46754 | 47899 | + | GT4 |
| CAZyme | k141_144634 | k141_144634_51 | 47948 | 48928 | + | GT2 |
| pfam | k141_144634 | k141_144634_52 | 48925 | 49734 | + | ABC2_membrane |
| TC | k141_144634 | k141_144634_53 | 49750 | 50940 | + | 3.A.1.103.5 |
| pfam | k141_144634 | k141_144634_54 | 50933 | 52297 | + | DUF2142 |
| CAZyme | k141_144634 | k141_144634_55 | 52306 | 53271 | + | GT2 |
| pfam | k141_144634 | k141_144634_56 | 53268 | 55025 | + | RgpF |
| CAZyme | k141_144634 | k141_144634_57 | 55036 | 55767 | + | GT2 |
| pfam | k141_144634 | k141_144634_58 | 55764 | 56132 | + | DUF2304 |
| pfam | k141_144634 | k141_144634_59 | 56158 | 57324 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | k141_144634 | k141_144634_60 | 57311 | 58108 | + | GT2 |
| CAZyme | k141_144634 | k141_144634_61 | 58142 | 59275 | + | GT4 |
| pfam | k141_144634 | k141_144634_62 | 59323 | 60318 | + | Stealth_CR2 |
| CAZyme | k141_144634 | k141_144634_63 | 60342 | 61454 | + | GT4 |
| TC | k141_144634 | k141_144634_64 | 61486 | 62907 | + | 2.A.66.2.23 |
Gene ID: k141_144634_50
Type: CAZyme
Location: 46754 - 47899 (+)
Type: CAZyme
Location: 46754 - 47899 (+)
Gene ID: k141_144634_51
Type: CAZyme
Location: 47948 - 48928 (+)
Type: CAZyme
Location: 47948 - 48928 (+)
Gene ID: k141_144634_52
Type: pfam
Location: 48925 - 49734 (+)
Type: pfam
Location: 48925 - 49734 (+)
Gene ID: k141_144634_53
Type: TC
Location: 49750 - 50940 (+)
Type: TC
Location: 49750 - 50940 (+)
Gene ID: k141_144634_54
Type: pfam
Location: 50933 - 52297 (+)
Type: pfam
Location: 50933 - 52297 (+)
Gene ID: k141_144634_55
Type: CAZyme
Location: 52306 - 53271 (+)
Type: CAZyme
Location: 52306 - 53271 (+)
Gene ID: k141_144634_56
Type: pfam
Location: 53268 - 55025 (+)
Type: pfam
Location: 53268 - 55025 (+)
Gene ID: k141_144634_57
Type: CAZyme
Location: 55036 - 55767 (+)
Type: CAZyme
Location: 55036 - 55767 (+)
Gene ID: k141_144634_58
Type: pfam
Location: 55764 - 56132 (+)
Type: pfam
Location: 55764 - 56132 (+)
Gene ID: k141_144634_59
Type: pfam
Location: 56158 - 57324 (+)
Type: pfam
Location: 56158 - 57324 (+)
Gene ID: k141_144634_60
Type: CAZyme
Location: 57311 - 58108 (+)
Type: CAZyme
Location: 57311 - 58108 (+)
Gene ID: k141_144634_61
Type: CAZyme
Location: 58142 - 59275 (+)
Type: CAZyme
Location: 58142 - 59275 (+)
Gene ID: k141_144634_62
Type: pfam
Location: 59323 - 60318 (+)
Type: pfam
Location: 59323 - 60318 (+)
Gene ID: k141_144634_63
Type: CAZyme
Location: 60342 - 61454 (+)
Type: CAZyme
Location: 60342 - 61454 (+)
Gene ID: k141_144634_64
Type: TC
Location: 61486 - 62907 (+)
Type: TC
Location: 61486 - 62907 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus taiwanensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.