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Cluster: AG261_bin.11_sub_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_118147 k141_118147_156 162913 165066 - GH92
TF k141_118147 k141_118147_157 165063 166100 - GntR
CAZyme k141_118147 k141_118147_158 166305 167633 + GH125
CAZyme k141_118147 k141_118147_159 167668 170367 + GH38
TC k141_118147 k141_118147_160 170364 171296 + 3.A.1.1.10
TC k141_118147 k141_118147_161 171352 172272 + 3.A.1.1.29
pfam k141_118147 k141_118147_162 172375 173826 + SBP_bac_1 | DUF3502 | SBP_bac_8
TC k141_118147 k141_118147_163 174036 174644 + 9.B.28.1.11
CAZyme k141_118147 k141_118147_164 174674 176101 + GH1
Gene ID: k141_118147_156
Type: CAZyme
Location: 162913 - 165066 (-)
Gene ID: k141_118147_157
Type: TF
Location: 165063 - 166100 (-)
Gene ID: k141_118147_158
Type: CAZyme
Location: 166305 - 167633 (+)
Gene ID: k141_118147_159
Type: CAZyme
Location: 167668 - 170367 (+)
Gene ID: k141_118147_160
Type: TC
Location: 170364 - 171296 (+)
Gene ID: k141_118147_161
Type: TC
Location: 171352 - 172272 (+)
Gene ID: k141_118147_162
Type: pfam
Location: 172375 - 173826 (+)
Gene ID: k141_118147_163
Type: TC
Location: 174036 - 174644 (+)
Gene ID: k141_118147_164
Type: CAZyme
Location: 174674 - 176101 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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