Genome Details
Selected Rep_genome_ID: AG085_9
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
UBA953
Genus
Spyradosoma
Species
Spyradosoma merdigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG085_9 | 1,907,667 | 93.24% | 0.68% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_4400 | 1,782,933 | 93.2% | 1.351% | China | Asia | HRGM |
| Rep_576 | 1,815,137 | 93.2432% | 0.810811% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG085_9_CGC21 | CGCFAM_00018 | Yes | 5 | 2 | |
| AG085_9_CGC4 | CGCFAM_00036 | Yes | 10 | 5 | |
| AG085_9_CGC13 | CGCFAM_04563 | Yes | 4 | 1 | |
| AG085_9_CGC16 | CGCFAM_04564 | Yes | 3 | 1 | |
| AG085_9_CGC18 | CGCFAM_04565 | Yes | 4 | 1 | |
| AG085_9_CGC25 | CGCFAM_04566 | Yes | 3 | 1 | |
| AG085_9_CGC8 | CGCFAM_04567 | Yes | 4 | 1 | |
| AG085_9_CGC5 | CGCFAM_06796 | Yes | 8 | 1 | |
| AG085_9_CGC10 | CGCFAM_06949 | Yes | 4 | 1 |
Top CAZyme Families