Cluster: AG085_9_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: AG085_9
- CGC Family ID: CGCFAM_04563
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_68871 | k141_68871_32 | 46088 | 46699 | + | 4.F.1.1.7 |
| pfam | k141_68871 | k141_68871_33 | 46696 | 47235 | + | PgpA |
| NULL(UNKNOWN) | k141_68871 | k141_68871_34 | 47275 | 47526 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_68871 | k141_68871_35 | 47621 | 49045 | - | GH29 |
Gene ID: k141_68871_32
Type: TC
Location: 46088 - 46699 (+)
Type: TC
Location: 46088 - 46699 (+)
Gene ID: k141_68871_33
Type: pfam
Location: 46696 - 47235 (+)
Type: pfam
Location: 46696 - 47235 (+)
Gene ID: k141_68871_34
Type:
Location: 47275 - 47526 (+)
Type:
Location: 47275 - 47526 (+)
Gene ID: k141_68871_35
Type: CAZyme
Location: 47621 - 49045 (-)
Type: CAZyme
Location: 47621 - 49045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
UBA953
Genus
Spyradosoma
Species
Spyradosoma merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.