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Cluster: AG085_9_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80440 k141_80440_195 252238 253533 + 9.B.20.3.1
pfam k141_80440 k141_80440_196 253556 255889 - Mur_ligase | FAD_binding_4 | MurB_C | Mur_ligase_C | Mur_ligase_M
CAZyme k141_80440 k141_80440_197 255925 257049 - GT28
TC k141_80440 k141_80440_198 257046 258338 - 2.A.103.1.1
pfam k141_80440 k141_80440_199 258407 259345 - LysM | LysM
NULL(UNKNOWN) k141_80440 k141_80440_200 259597 261354 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_80440 k141_80440_201 261407 262522 + 3.A.11.1.3
TC k141_80440 k141_80440_202 262844 263761 - 3.A.5.1.1
Gene ID: k141_80440_195
Type: TC
Location: 252238 - 253533 (+)
Gene ID: k141_80440_196
Type: pfam
Location: 253556 - 255889 (-)
Gene ID: k141_80440_197
Type: CAZyme
Location: 255925 - 257049 (-)
Gene ID: k141_80440_198
Type: TC
Location: 257046 - 258338 (-)
Gene ID: k141_80440_199
Type: pfam
Location: 258407 - 259345 (-)
Gene ID: k141_80440_200
Type:
Location: 259597 - 261354 (+)
Gene ID: k141_80440_201
Type: TC
Location: 261407 - 262522 (+)
Gene ID: k141_80440_202
Type: TC
Location: 262844 - 263761 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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