Cluster: AG085_9_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: AG085_9
- CGC Family ID: CGCFAM_00018
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_138932 | k141_138932_31 | 38738 | 39934 | - | GT4 |
| TC | k141_138932 | k141_138932_32 | 40186 | 41220 | + | 9.B.18.2.1 |
| pfam | k141_138932 | k141_138932_33 | 41217 | 42431 | + | Epimerase | Polysacc_synt_C |
| pfam | k141_138932 | k141_138932_34 | 42428 | 43612 | + | Epimerase_2 |
| CAZyme | k141_138932 | k141_138932_35 | 43609 | 44712 | + | GT4 |
Gene ID: k141_138932_31
Type: CAZyme
Location: 38738 - 39934 (-)
Type: CAZyme
Location: 38738 - 39934 (-)
Gene ID: k141_138932_32
Type: TC
Location: 40186 - 41220 (+)
Type: TC
Location: 40186 - 41220 (+)
Gene ID: k141_138932_33
Type: pfam
Location: 41217 - 42431 (+)
Type: pfam
Location: 41217 - 42431 (+)
Gene ID: k141_138932_34
Type: pfam
Location: 42428 - 43612 (+)
Type: pfam
Location: 42428 - 43612 (+)
Gene ID: k141_138932_35
Type: CAZyme
Location: 43609 - 44712 (+)
Type: CAZyme
Location: 43609 - 44712 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
UBA953
Genus
Spyradosoma
Species
Spyradosoma merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_138932_34 | vegan > omnivore | 1.88917 | 0.00455 |