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Cluster: HRGMv2_4539_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4539_50 HRGMv2_4539_50_1 230 1771 - 2.A.66.1.40
NULL(UNKNOWN) HRGMv2_4539_50 HRGMv2_4539_50_2 1771 3021 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4539_50 HRGMv2_4539_50_3 3018 5123 - GT2
NULL(UNKNOWN) HRGMv2_4539_50 HRGMv2_4539_50_4 5414 6484 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4539_50 HRGMv2_4539_50_5 6512 7729 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4539_50 HRGMv2_4539_50_6 7993 10053 - GT2 | GT4
pfam HRGMv2_4539_50 HRGMv2_4539_50_7 10068 10313 - Hexapep
CAZyme HRGMv2_4539_50 HRGMv2_4539_50_8 10536 11696 - GT4
CAZyme HRGMv2_4539_50 HRGMv2_4539_50_9 11830 12768 - GT2
Gene ID: HRGMv2_4539_50_1
Type: TC
Location: 230 - 1771 (-)
Gene ID: HRGMv2_4539_50_2
Type:
Location: 1771 - 3021 (-)
Gene ID: HRGMv2_4539_50_3
Type: CAZyme
Location: 3018 - 5123 (-)
Gene ID: HRGMv2_4539_50_4
Type:
Location: 5414 - 6484 (-)
Gene ID: HRGMv2_4539_50_5
Type:
Location: 6512 - 7729 (-)
Gene ID: HRGMv2_4539_50_6
Type: CAZyme
Location: 7993 - 10053 (-)
Gene ID: HRGMv2_4539_50_7
Type: pfam
Location: 10068 - 10313 (-)
Gene ID: HRGMv2_4539_50_8
Type: CAZyme
Location: 10536 - 11696 (-)
Gene ID: HRGMv2_4539_50_9
Type: CAZyme
Location: 11830 - 12768 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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