dbCAN Logo

PROTEIN: HRGMv2_4539_50_4

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4539_50_4.pdb
Genome ID:
HRGMv2_4539
Protein ID:
HRGMv2_4539_50_4

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MVSSASLRLQ   KNSIIYILDI   GARTGGGEAL   YQLRLDLEHM   GYEAYILYYQ   EDLSTLNLSE 60
KFLQYFDGAQ   KICTRKDVID   DKNNCIIVPE   AATTYLFDYP   NLQKIIWWLS   IHNYDGAYVK 120
REPRHSSLLN   PLKKVYHRIQ   FWKLAAARMQ   KYHKVCFPLN   QVALHMAGSY   YVLETLKTKY 180
HIQSELLIHS   IGIDFLKMGE   WSRQQDIASR   EDIVLYNPSK   PSSIMHQLLQ   RNKFHYVPIC 240
NMTPTQMIAL   FRKSKLYIDF   GFFPGPERLP   KETVYNGVAV   LVGKRNASVN   PYDVMIPEEY 300
KLDPHTKPEL   VEMKIADMLE   RYDEIYHDFD   AFRKMITEME   PNYYLQLKKF   FQGDLE 356
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GSJ8-F1-model_v4 10 356 1 354 0.724 0.7624
AF-K0EVT3-F1-model_v4 9 355 1 377 0.7237 0.7897
AF-K0F1D2-F1-model_v4 10 356 2 369 0.7096 0.7616
AF-O05083-F1-model_v4 11 351 1 353 0.7058 0.7514
AF-Q58577-F1-model_v4 10 356 1 351 0.701 0.7337
AF-Q0P9C9-F1-model_v4 13 355 1 374 0.6952 0.7595
AF-Q5F734-F1-model_v4 9 351 2 354 0.6948 0.7385
AF-X8FFM7-F1-model_v4 9 356 2 379 0.6923 0.755
AF-P96407-F1-model_v4 9 356 2 376 0.6915 0.7519
AF-K0F8N2-F1-model_v4 10 356 1 376 0.6915 0.7594
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0P0YIJ8-F1-model_v4 GT4 13 356 1 320 0.7448 0.8061
AF-Q8ZYZ2-F1-model_v4 GT4 11 354 1 402 0.7405 0.828
AF-A0A0K1E272-F1-model_v4 GT4 12 354 1 397 0.7341 0.82
AF-F0QUU0-F1-model_v4 GT4 13 355 1 402 0.7327 0.8227
AF-A0A2P1QR83-F1-model_v4 GT4 13 353 1 353 0.732 0.7798
AF-A0A4P2VDX3-F1-model_v4 GT4 12 356 1 394 0.7314 0.8102
AF-A0A2R4L0Q3-F1-model_v4 GT4 13 353 1 353 0.7309 0.7788
AF-G7VHZ6-F1-model_v4 GT4 12 351 1 395 0.73 0.8203
AF-K8Y375-F1-model_v4 GT4 13 353 1 353 0.7299 0.7778
A0A328YXK1 GT4 10 353 1 363 0.7285 0.7814
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0U5N1K8 GT4 12 356 1 317 0.7525 0.813
A0A7U7J0M3 GT4 10 356 1 319 0.7519 0.8104
A0A0P0YIJ8 GT4 13 356 1 320 0.7448 0.8061
A0A5J6LC48 GT4 10 356 4 343 0.7446 0.7829
F7Y3P7 GT4 14 356 1 291 0.7437 0.8446
WFB35513.1 GT4 14 356 1 291 0.7382 0.8326
A0A328YXK1 GT4 10 353 1 363 0.7285 0.7814
I0A116 GT4 9 356 1 376 0.7283 0.7877
A0A857NB29 GT4 10 356 2 380 0.7274 0.7887
E8R9N1 GT4 10 356 2 410 0.7272 0.8209
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8fbx-assembly2.cif.gz_B 11 356 1 301 0.6892 0.7673
6kih-assembly2.cif.gz_B 11 356 1 398 0.6887 0.7649
6ejj-assembly1.cif.gz_A 11 356 1 359 0.6873 0.732
7qsg-assembly1.cif.gz_A 9 355 1 377 0.682 0.7403
6n1x-assembly1.cif.gz_A 9 355 1 376 0.679 0.7348
3c4q-assembly2.cif.gz_B 11 356 1 391 0.6723 0.7433
3c4q-assembly1.cif.gz_A 13 355 1 391 0.6708 0.7469
7mi0-assembly1.cif.gz_A 10 356 1 379 0.6697 0.727
2gek-assembly1.cif.gz_A 11 356 1 354 0.6663 0.7103
5d00-assembly1.cif.gz_B 10 355 1 361 0.6661 0.7079
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B3H2N1-F1-model_v4 9 356 3 324 0.765 0.8295
AF-Q46634-F1-model_v4 11 352 1 351 0.7105 0.7533
AF-O05083-F1-model_v4 11 351 1 353 0.7058 0.7514
AF-Q4JAK2-F1-model_v4 11 355 1 352 0.702 0.7404
AF-Q0P9C7-F1-model_v4 11 353 1 365 0.6902 0.7431
AF-D7GDZ9-F1-model_v4 11 355 1 365 0.683 0.747
AF-P9WMY5-F1-model_v4 9 356 1 374 0.6825 0.7388
AF-P9WMY4-F1-model_v4 9 355 1 371 0.6789 0.7374
AF-A0QRG8-F1-model_v4 11 356 1 372 0.6782 0.736
AF-P71237-F1-model_v4 11 354 1 405 0.678 0.7647
Download Full SwissProt Results