PROTEIN: HRGMv2_4539_50_5
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Protein File & Metadata
Source:
HRGMv2_4539_50_5.pdb
Genome ID:
Protein ID:
HRGMv2_4539_50_5
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Protein Sequence
MYIVRIGGIP VSTLLAVICI IVIIICRGKV ALLGDKCFFA FLCASTLTTI LMLLSDTTNF 60 KTQIITLGVM GILYFCITQM KLLPDSSIKI FFSGLRLSCI LHLAWCLIQF FAYQLFDMDI 120 NRMIFVDALN MVSNASRYRE GTLAITGFCW HPSNLIPVLL ISGILLNRWY IWVICFFIVI 180 YAHSGTALLG LMIAFILVLP LHIPQVVVRI KKIKISTVFL FFMTVSVVIV VLVKTDLFSI 240 MIEKYRELYE RVFSTGDMSA QVHMRYYVML PFVWLNSSIL EILFGCGLGC SGVLFSRYFN 300 QYTQLDAWIV ESDPMNYMYS VGIVGFLLFY TWIFQLFRSA KGKNKRYSLL LVCLIICGIT 360 YNVQYEWVIM IELAMAICLK RDIDIFQSDS LLWQEKKPKR KIKLC 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D9S8K7-F1-model_v4 | GT4 | 1 | 403 | 28 | 763 | 0.5359 |
0.7169 |
| AF-B5YD26-F1-model_v4 | GT9 | 1 | 405 | 56 | 570 | 0.5316 |
0.7057 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 1 | 405 | 35 | 527 | 0.5191 |
0.7052 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 383 | 36 | 445 | 0.5174 |
0.7124 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 1 | 403 | 401 | 800 | 0.4489 |
0.6089 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 1 | 384 | 18 | 404 | 0.6376 |
0.6968 |
| D9S8K7 | GT4 | 1 | 403 | 28 | 763 | 0.5359 |
0.7169 |
| B5YD26 | GT9 | 1 | 405 | 56 | 570 | 0.5316 |
0.7057 |
| R4KL74 | GT4 | 1 | 384 | 63 | 441 | 0.5233 |
0.7598 |
| B8IGI7 | GH16_7 | 1 | 405 | 35 | 527 | 0.5191 |
0.7052 |
| A0A517MXC4 | GT26 | 1 | 383 | 36 | 445 | 0.5174 |
0.7124 |
| A0A5B7R2V6 | GH5_39 | 1 | 403 | 401 | 800 | 0.4489 |
0.6089 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 5 | 399 | 4 | 399 | 0.6833 |
0.7201 |