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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna28350.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 324 Molecular Weight: 35495.5 Isoelectric Point: 7.9931 |
Chromosome | Chromosome/Scaffold: 4 Start: 10181815 End: 10182786 |
Description | Peroxidase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 36 | 306 | 0 |
QIVQDIVTNKQISTPTTAAATLRLFFHDCLHNGCDASVLISSTHFNKAERDADINLSLPGDAFDVVVRAKTAVELACPGTVSCADILAVAARDLVTMMGG PYYNVPLGRRDGKSSHAAAVDGTLPLPTMTISQLIELFGSRGFSAQEMVALTGAHTIGFSHCKEFTAAIYNYSSAAQSDPEYNPRYAAGLRNACADFQKN PTLSVFNDIMTPNKFDNAYFQNLPKGLGLLKSDHALFNDPRTRPFVELYAKDQGKFFYAFARAMEKLSVYG |
Full Sequence |
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Protein Sequence Length: 324 Download |
MAVLLILFLV LLSSSASIES RLYTNYYSKS CPRFTQIVQD IVTNKQISTP TTAAATLRLF 60 FHDCLHNGCD ASVLISSTHF NKAERDADIN LSLPGDAFDV VVRAKTAVEL ACPGTVSCAD 120 ILAVAARDLV TMMGGPYYNV PLGRRDGKSS HAAAVDGTLP LPTMTISQLI ELFGSRGFSA 180 QEMVALTGAH TIGFSHCKEF TAAIYNYSSA AQSDPEYNPR YAAGLRNACA DFQKNPTLSV 240 FNDIMTPNKF DNAYFQNLPK GLGLLKSDHA LFNDPRTRPF VELYAKDQGK FFYAFARAME 300 KLSVYGIQTG RKGEIRRRCD EFN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 5.0e-7 | 256 | 287 | 32 | + Peroxidase. | ||
cd00691 | ascorbate_peroxidase | 3.0e-31 | 116 | 307 | 200 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 2.0e-59 | 38 | 192 | 155 | + Peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-72 | 26 | 323 | 306 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 1.0e-155 | 22 | 320 | 299 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 22 | 323 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gx2_B | 0 | 21 | 323 | 2 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gx2_A | 0 | 21 | 323 | 2 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3atj_B | 0 | 21 | 323 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3atj_A | 0 | 21 | 323 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |