y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g030630.1 |
Family | AA2 |
Protein Properties | Length: 371 Molecular Weight: 39712.8 Isoelectric Point: 10.2481 |
Chromosome | Chromosome/Scaffold: 3 Start: 58833619 End: 58836380 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 88 | 347 | 0 |
PAAGPAVLRLFHHDCFVEGCDASVLIAPTADAAARSPPRVERDVEENRNLPQEAFDTVELAKAAVESKCPGIVSCADVLALAARDYVQLAGGPYYAVKKG RKDSKVSLAGKVRGSLPRANSTVDELLRVFAGKGLGAADLVALSGAHTVGFAHCVHVLGRIYDFRGTRRPDPLMDGRLVKALRMSCPSSGGSARVVVPFD VSTPFQFDHAYYGNLQARLGLLASDQALFLDARTRPLVQDLAGNKTRFFQAFVASIDRMG |
Full Sequence |
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Protein Sequence Length: 371 Download |
MDSSRGAIRF LVHRRVLLLL LLVASSSLVG TSRGREAQPL PVAAAATVLG SRRAPERHGL 60 ALDFYAKTCP AVDQIVGNVT AARYRDFPAA GPAVLRLFHH DCFVEGCDAS VLIAPTADAA 120 ARSPPRVERD VEENRNLPQE AFDTVELAKA AVESKCPGIV SCADVLALAA RDYVQLAGGP 180 YYAVKKGRKD SKVSLAGKVR GSLPRANSTV DELLRVFAGK GLGAADLVAL SGAHTVGFAH 240 CVHVLGRIYD FRGTRRPDPL MDGRLVKALR MSCPSSGGSA RVVVPFDVST PFQFDHAYYG 300 NLQARLGLLA SDQALFLDAR TRPLVQDLAG NKTRFFQAFV ASIDRMGSIR IKKGRKGEVR 360 KVCSQHLLSA * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 4.0e-5 | 301 | 331 | 31 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 6.0e-23 | 81 | 348 | 298 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 8.0e-50 | 76 | 236 | 161 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-67 | 58 | 364 | 313 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 3.0e-138 | 59 | 364 | 306 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71236.1 | 0 | 51 | 367 | 58 | 373 | hypothetical protein OsI_03192 [Oryza sativa Indica Group] |
GenBank | EEE55147.1 | 0 | 51 | 367 | 58 | 373 | hypothetical protein OsJ_02943 [Oryza sativa Japonica Group] |
RefSeq | XP_002305096.1 | 0 | 45 | 366 | 28 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002456109.1 | 0 | 1 | 370 | 1 | 370 | hypothetical protein SORBIDRAFT_03g030630 [Sorghum bicolor] |
RefSeq | XP_002522523.1 | 0 | 45 | 366 | 47 | 363 | Peroxidase 19 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 64 | 363 | 7 | 300 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1pa2_A | 0 | 64 | 363 | 7 | 300 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1gwo_A | 0 | 64 | 363 | 7 | 302 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
PDB | 1gx2_B | 0 | 64 | 363 | 7 | 302 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gx2_A | 0 | 64 | 363 | 7 | 302 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |