y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048020m |
Family | AA2 |
Protein Properties | Length: 367 Molecular Weight: 39393.9 Isoelectric Point: 6.2517 |
Chromosome | Chromosome/Scaffold: 0163749 Start: 743 End: 1843 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 78 | 344 | 0 |
KQMANPTTAAGVLRVFFHDCFVSGCDASVLIASNQFAKSEHDAEINHSLPGDAFDAVVRAKLALELECPGVVSCADILALASRVLVTMTGGPRYPVSLGR RDSLSSSPTAPDVELPHANYTVDRLIQMFGAKGFTVQELVALSGAHTLGFSHCKEFADRLYNFRDKGGKPEDFDPSMNQSYAKGLQAVCKDYLKDPTIAA FNDIMTPGKFDNMYFVNLERGLGLLSTDEELFTDPRTKPLVQRYAANSTAFFDDFGRAMEKLSLFGV |
Full Sequence |
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Protein Sequence Length: 367 Download |
MSAMRLSLLL LVAAAALSAR AAAQMPPFQG GQQGPPVVPA GGQVQPQPVA GGGPLSPEFY 60 SQSCPRTERI IAEVVQSKQM ANPTTAAGVL RVFFHDCFVS GCDASVLIAS NQFAKSEHDA 120 EINHSLPGDA FDAVVRAKLA LELECPGVVS CADILALASR VLVTMTGGPR YPVSLGRRDS 180 LSSSPTAPDV ELPHANYTVD RLIQMFGAKG FTVQELVALS GAHTLGFSHC KEFADRLYNF 240 RDKGGKPEDF DPSMNQSYAK GLQAVCKDYL KDPTIAAFND IMTPGKFDNM YFVNLERGLG 300 LLSTDEELFT DPRTKPLVQR YAANSTAFFD DFGRAMEKLS LFGVKTGADG EIRRRCDAYN 360 NGPMPK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 2.0e-6 | 293 | 324 | 32 | + Peroxidase. | ||
cd00691 | ascorbate_peroxidase | 1.0e-31 | 149 | 345 | 205 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 4.0e-57 | 71 | 224 | 154 | + Peroxidase. | ||
PLN03030 | PLN03030 | 3.0e-79 | 59 | 360 | 309 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-153 | 55 | 359 | 306 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF83301.1 | 0 | 1 | 363 | 7 | 347 | unknown [Zea mays] |
GenBank | EAZ24568.1 | 0 | 11 | 366 | 75 | 434 | hypothetical protein OsJ_08330 [Oryza sativa Japonica Group] |
RefSeq | NP_001148668.1 | 0 | 2 | 363 | 8 | 345 | LOC100282284 [Zea mays] |
RefSeq | NP_001151254.1 | 0 | 1 | 363 | 7 | 347 | peroxidase 65 [Zea mays] |
RefSeq | XP_002454306.1 | 0 | 50 | 363 | 34 | 347 | hypothetical protein SORBIDRAFT_04g028340 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 55 | 360 | 3 | 304 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 1pa2_A | 0 | 55 | 360 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1sch_B | 0 | 55 | 360 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 55 | 360 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1gx2_B | 0 | 55 | 360 | 3 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |