y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C02389.1 |
Family | AA2 |
Protein Properties | Length: 326 Molecular Weight: 35570.6 Isoelectric Point: 9.3149 |
Chromosome | Chromosome/Scaffold: 3 Start: 44356565 End: 44359254 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 39 | 309 | 0 |
LVRSAVTKKFQQTFVTAPATLRLLFHDCFVRGCDASVLIASPTNNAEKDHPDDLSLAGDGFDTVIKAKAAVDSVPQCKNKVSCADILALATRDVVSLAGG PFYSVELGRRDGRISTKLGVQHNLPQPGSKLDQLNSMFSSHGLSQTDMIALSGAHTIGFSHCGKFSKRIYNFSPRSSIDPTLNFRYALQLRQMCPINVDP RIAINMDPTTPQTFDNAYYKNLQQGKGLFVSDQTLFSDPRSRATVNLFASNNAAFQQAFVTAITKMGRIGV |
Full Sequence |
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Protein Sequence Length: 326 Download |
MEARRFLVSC LSFALLLSAV SAQLRTDFYK NTCPNVESLV RSAVTKKFQQ TFVTAPATLR 60 LLFHDCFVRG CDASVLIASP TNNAEKDHPD DLSLAGDGFD TVIKAKAAVD SVPQCKNKVS 120 CADILALATR DVVSLAGGPF YSVELGRRDG RISTKLGVQH NLPQPGSKLD QLNSMFSSHG 180 LSQTDMIALS GAHTIGFSHC GKFSKRIYNF SPRSSIDPTL NFRYALQLRQ MCPINVDPRI 240 AINMDPTTPQ TFDNAYYKNL QQGKGLFVSD QTLFSDPRSR ATVNLFASNN AAFQQAFVTA 300 ITKMGRIGVK TGNQGEIRID CTRPN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.0005 | 258 | 284 | 27 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 7.0e-19 | 55 | 306 | 285 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 1.0e-57 | 40 | 195 | 156 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-68 | 25 | 325 | 306 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-152 | 27 | 323 | 298 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX84669.1 | 0 | 22 | 323 | 25 | 326 | secretory peroxidase PX3 [Manihot esculenta] |
GenBank | ACU23164.1 | 0 | 1 | 325 | 1 | 324 | unknown [Glycine max] |
GenBank | ADD54643.1 | 0 | 23 | 325 | 26 | 328 | peroxidase [Bruguiera gymnorhiza] |
RefSeq | XP_002324463.1 | 0 | 1 | 325 | 1 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532803.1 | 0 | 23 | 325 | 27 | 329 | Peroxidase 16 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 23 | 325 | 2 | 304 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 1pa2_A | 0 | 23 | 325 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3hdl_A | 0 | 24 | 325 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 4a5g_B | 0 | 22 | 325 | 2 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 4a5g_A | 0 | 22 | 325 | 2 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |