y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10032035 |
Family | AA2 |
Protein Properties | Length: 328 Molecular Weight: 34341.9 Isoelectric Point: 4.9389 |
Chromosome | Chromosome/Scaffold: 42 Start: 616106 End: 619497 |
Description | root hair specific 19 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 47 | 310 | 0 |
VQQVVAAKAGRQFPTLPATLRLFFHDCFVTGCDASVMVASPNGDAEKDAPDNLSLAGDGFDAVSRAKTAVEAICPGVVSCADIIAIAARDVVALAGGPTF AVELGRRDGMISSASLVAGNLPEPNMTLPELNAIFAKHNLTQFDMIALSGAHTLGFSHCNRFFDRIYSSTVDPSLNSTYAQELMTACPRDVDPSIAIDMD PTTPRAFDNVYYQNLVEGKGMFSSDQVLFTDGRSRATVVDFARSAADFNGGFAAAMRKLGRVGV |
Full Sequence |
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Protein Sequence Length: 328 Download |
MGYFSSSTAA MIMIIVAITI AGGGGVSGQG LRENFYAGSC PMVEAVVQQV VAAKAGRQFP 60 TLPATLRLFF HDCFVTGCDA SVMVASPNGD AEKDAPDNLS LAGDGFDAVS RAKTAVEAIC 120 PGVVSCADII AIAARDVVAL AGGPTFAVEL GRRDGMISSA SLVAGNLPEP NMTLPELNAI 180 FAKHNLTQFD MIALSGAHTL GFSHCNRFFD RIYSSTVDPS LNSTYAQELM TACPRDVDPS 240 IAIDMDPTTP RAFDNVYYQN LVEGKGMFSS DQVLFTDGRS RATVVDFARS AADFNGGFAA 300 AMRKLGRVGV KTGSQGRIRS DCSNVNS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 8.0e-5 | 259 | 290 | 32 | + Peroxidase. | ||
cd00691 | ascorbate_peroxidase | 6.0e-13 | 142 | 311 | 179 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 2.0e-44 | 63 | 199 | 137 | + Peroxidase. | ||
PLN03030 | PLN03030 | 9.0e-60 | 29 | 326 | 307 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 3.0e-131 | 30 | 323 | 299 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21341.1 | 0 | 28 | 327 | 7 | 292 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274131.1 | 0 | 11 | 327 | 12 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298633.1 | 0 | 28 | 327 | 6 | 310 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328876.1 | 0 | 11 | 327 | 6 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509503.1 | 0 | 28 | 327 | 26 | 330 | Peroxidase 55 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3atj_B | 0 | 31 | 327 | 3 | 307 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3atj_A | 0 | 31 | 327 | 3 | 307 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 1gwt_A | 0 | 31 | 327 | 3 | 307 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3hdl_A | 0 | 31 | 327 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gwo_A | 0 | 31 | 327 | 3 | 307 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |