y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra005456 |
Family | AA2 |
Protein Properties | Length: 319 Molecular Weight: 35409 Isoelectric Point: 10.1982 |
Chromosome | Chromosome/Scaffold: 05 Start: 5582050 End: 5584003 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 57 | 301 | 7.56701e-44 |
ESLGCDGSILIETKKGSKNLAEREAEENKELREEGFESIIKAKALVESHCPSRVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTATNVPPNIPRS NSTVDQLINLFASKGLTVEDLVVLSGSHTIGFAHCKSFVGRLYDFKGIKRPDPNINPKLLKELRMYCPFSGRSSRAALPLDATTPFAFDNGYYKGLGSNM GLLGSDQALFLDPRTKPIVLEMARDKQKFLKAFGDAMDKMGSIGV |
Full Sequence |
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Protein Sequence Length: 319 Download |
MHVLSLTSSL IFRFLFLIST IPISPAKSTT SHLQTQPRLR HRKLSIDYYS KKCPQLESLG 60 CDGSILIETK KGSKNLAERE AEENKELREE GFESIIKAKA LVESHCPSRV SCSDILAIAA 120 RDFIHLAGGP YYQVKKGRWD GKRSTATNVP PNIPRSNSTV DQLINLFASK GLTVEDLVVL 180 SGSHTIGFAH CKSFVGRLYD FKGIKRPDPN INPKLLKELR MYCPFSGRSS RAALPLDATT 240 PFAFDNGYYK GLGSNMGLLG SDQALFLDPR TKPIVLEMAR DKQKFLKAFG DAMDKMGSIG 300 VKRGRKHGEI RKDCRVFL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 2.0e-5 | 250 | 281 | 32 | + Peroxidase. | ||
cd00691 | ascorbate_peroxidase | 6.0e-16 | 108 | 302 | 205 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 2.0e-39 | 60 | 186 | 127 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-49 | 46 | 314 | 314 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 8.0e-127 | 43 | 317 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL86286.1 | 0 | 9 | 318 | 1 | 338 | putative peroxidase [Arabidopsis thaliana] |
RefSeq | NP_180953.1 | 0 | 1 | 318 | 1 | 346 | peroxidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002272881.1 | 0 | 30 | 318 | 27 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305096.1 | 0 | 42 | 314 | 39 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522523.1 | 0 | 16 | 316 | 32 | 362 | Peroxidase 19 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 44 | 316 | 2 | 301 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gx2_B | 0 | 60 | 316 | 49 | 304 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gx2_A | 0 | 60 | 316 | 49 | 304 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1kzm_A | 0 | 28 | 316 | 21 | 303 | A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp |
PDB | 1gwo_A | 0 | 60 | 316 | 49 | 304 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |