y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00031680m |
Family | AA2 |
Protein Properties | Length: 332 Molecular Weight: 35327.4 Isoelectric Point: 9.3954 |
Chromosome | Chromosome/Scaffold: 013070 Start: 1086 End: 4131 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 50 | 315 | 0 |
VTQKLQETFNAAPGTLRLFFHDCFVRGCDASVLLSGPDDEHSAGADTTLSPDALDLITRAKAAVDADPRCANKVSCADILALAARDVVSQTGGPYYPVEL GRLDGKVGTRAVVKHRLPGAGFDLDQLNKLFAANGLTQTDMIALSGGHTIGVTHCDKFVRRLYPFKGGAGAGGGPPMNLYFLRQMRQTCPLNYSPSAFAM LDAVSPRKFDNGYYQTLQQMKGLLASDQVLFADRRSRATVNYFAANQTAFFNAFVAAMAKLGRVGV |
Full Sequence |
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Protein Sequence Length: 332 Download |
MRSRAPSLRR SVVAAAAVAL AAAWCAAAQL SQSYYASTCP NVDTLVRGAV TQKLQETFNA 60 APGTLRLFFH DCFVRGCDAS VLLSGPDDEH SAGADTTLSP DALDLITRAK AAVDADPRCA 120 NKVSCADILA LAARDVVSQT GGPYYPVELG RLDGKVGTRA VVKHRLPGAG FDLDQLNKLF 180 AANGLTQTDM IALSGGHTIG VTHCDKFVRR LYPFKGGAGA GGGPPMNLYF LRQMRQTCPL 240 NYSPSAFAML DAVSPRKFDN GYYQTLQQMK GLLASDQVLF ADRRSRATVN YFAANQTAFF 300 NAFVAAMAKL GRVGVKTGSD GEIRRVCTKV N* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00691 | ascorbate_peroxidase | 3.0e-14 | 46 | 203 | 165 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 4.0e-55 | 46 | 205 | 166 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-64 | 38 | 331 | 298 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 1.0e-126 | 38 | 330 | 294 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABS86778.1 | 0 | 23 | 331 | 28 | 337 | peroxidase 16 precursor protein [Oryza sativa Indica Group] |
GenBank | ACF86227.1 | 0 | 34 | 331 | 37 | 331 | unknown [Zea mays] |
RefSeq | NP_001058450.1 | 0 | 23 | 331 | 28 | 337 | Os06g0695500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152697.1 | 0 | 34 | 331 | 37 | 331 | LOC100286338 [Zea mays] |
RefSeq | XP_002437516.1 | 0 | 29 | 331 | 35 | 336 | hypothetical protein SORBIDRAFT_10g028500 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 29 | 331 | 2 | 304 | A Chain A, Crystal Structure Of Protein Ef3133 From Enterococcus Faecalis V583, Pfam Duf984 |
PDB | 1pa2_A | 0 | 29 | 331 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3hdl_A | 0 | 34 | 331 | 6 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gwu_A | 0 | 29 | 331 | 2 | 306 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly |
PDB | 1gx2_B | 0 | 29 | 331 | 2 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |