y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb06g019850.1 |
Family | GH1 |
Protein Properties | Length: 518 Molecular Weight: 58754.7 Isoelectric Point: 8.0492 |
Chromosome | Chromosome/Scaffold: 6 Start: 49425564 End: 49432343 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 34 | 516 | 0 |
RRSFPEGFIFGTASAAYQAVHYANGSSNNVDDKIANRSNGDVAVDSYHLYKEDVRIMKSMGMDAYRFSISWSRILPYGSLSGGVNREGIRYYNNLIDELL LKGIQPFVTLFHWDSPQALEDKYGGFLSPNIINDYKDYAEVCFKEFGDRVKHWITFNEPWSFCSGGYASGTFAPGRCSPWEQGKCSAGDSGTEPYTVCHH QILAHAETVRLYKEKYKVEQKGNIGITLVSSWFVPFSHSKSNDDAARRAIDFMLGWFMDPLTRGEYPLSMRALVGNRLPQFTKEQSELVKGAFDFIGLNY YTTNYADNLPQSNGLNVSSRTDARVNLTGKYVLKSRINILLLFIYQVFGMVSQLVLRLHRSPWLFIYPRGFRELLLYVKENYGNPTVYITENGVDEANNK SLSLEEALKDDTRIEFHHAHFLALQSAIRDGANVKGYFAWSLLDNFEWASGYTVRFGIYFVDYNDGLKRYPKSSAHWFTEFLK |
Full Sequence |
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Protein Sequence Length: 518 Download |
MLARLLPLLL LLLLLAAASN ACDCAGRQPP ISSRRSFPEG FIFGTASAAY QAVHYANGSS 60 NNVDDKIANR SNGDVAVDSY HLYKEDVRIM KSMGMDAYRF SISWSRILPY GSLSGGVNRE 120 GIRYYNNLID ELLLKGIQPF VTLFHWDSPQ ALEDKYGGFL SPNIINDYKD YAEVCFKEFG 180 DRVKHWITFN EPWSFCSGGY ASGTFAPGRC SPWEQGKCSA GDSGTEPYTV CHHQILAHAE 240 TVRLYKEKYK VEQKGNIGIT LVSSWFVPFS HSKSNDDAAR RAIDFMLGWF MDPLTRGEYP 300 LSMRALVGNR LPQFTKEQSE LVKGAFDFIG LNYYTTNYAD NLPQSNGLNV SSRTDARVNL 360 TGKYVLKSRI NILLLFIYQV FGMVSQLVLR LHRSPWLFIY PRGFRELLLY VKENYGNPTV 420 YITENGVDEA NNKSLSLEEA LKDDTRIEFH HAHFLALQSA IRDGANVKGY FAWSLLDNFE 480 WASGYTVRFG IYFVDYNDGL KRYPKSSAHW FTEFLKK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 4.0e-134 | 33 | 516 | 490 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 6.0e-137 | 25 | 516 | 499 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-138 | 37 | 511 | 496 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 6.0e-148 | 38 | 511 | 489 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 36 | 517 | 501 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH66812.1 | 0 | 19 | 517 | 23 | 510 | OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] |
Swiss-Prot | Q7XKV4 | 0 | 19 | 517 | 23 | 510 | BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor |
RefSeq | XP_002448027.1 | 0 | 16 | 517 | 22 | 512 | hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor] |
RefSeq | XP_002448028.1 | 0 | 20 | 517 | 20 | 517 | hypothetical protein SORBIDRAFT_06g019850 [Sorghum bicolor] |
RefSeq | XP_002448029.1 | 0 | 1 | 517 | 1 | 485 | hypothetical protein SORBIDRAFT_06g019860 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 16 | 517 | 15 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptq_A | 0 | 16 | 517 | 15 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_B | 0 | 16 | 517 | 15 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_A | 0 | 16 | 517 | 15 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptk_B | 0 | 16 | 517 | 15 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |