y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G226100.1 |
Family | GH1 |
Protein Properties | Length: 542 Molecular Weight: 61329.9 Isoelectric Point: 5.4574 |
Chromosome | Chromosome/Scaffold: 01 Start: 23770035 End: 23775424 |
Description | beta glucosidase 16 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 48 | 523 | 0 |
RKSFPGDFIFGAAASAYQTEGHANKSCRGPSIWDTFTQDFPERIADGCNGDLGIDLYNRYESDLEEMKDMNMDAFRFSISWSRVIPSGKIRAGVNKDGIE FYNKLIDATIAKGLQPYATLFHWDVPQALEDKYGGFLSDNIVSDFRDFAELCFKEFGDRVKYWITLNEPQKFTGDGYDSGHFAPGRCSKWVDEKYCINGN SSTEPYIVAHNLLLSHAAAVHTYWEKYQASQNGKIGVTLNARWFEPYSNSTEDRNAAKRSLDFMLGWFLNPITYGDYPSSMRELVNDRLPTFSPLDSINL KGSLDFVGLNYYTAYYAANANSSSPDPRRYQTDSNCIITGERDGKPIGPQAGVSWQYIYPEGLQYMLNHIKDTYNNPVIYITENGYGEVVKTDVQLHHGT VMDLPRVEYHCTHLRNVVASIKNHGVQVKGYFVWSFADNFEFTDGYTIGFGLLYVNRTSNFTRIAKLSSHWFTEFL |
Full Sequence |
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Protein Sequence Length: 542 Download |
MAIPTGLLLL GMLFLMFSFA SAQIEMPRGI TEDFDTTCIT DLKFGLSRKS FPGDFIFGAA 60 ASAYQTEGHA NKSCRGPSIW DTFTQDFPER IADGCNGDLG IDLYNRYESD LEEMKDMNMD 120 AFRFSISWSR VIPSGKIRAG VNKDGIEFYN KLIDATIAKG LQPYATLFHW DVPQALEDKY 180 GGFLSDNIVS DFRDFAELCF KEFGDRVKYW ITLNEPQKFT GDGYDSGHFA PGRCSKWVDE 240 KYCINGNSST EPYIVAHNLL LSHAAAVHTY WEKYQASQNG KIGVTLNARW FEPYSNSTED 300 RNAAKRSLDF MLGWFLNPIT YGDYPSSMRE LVNDRLPTFS PLDSINLKGS LDFVGLNYYT 360 AYYAANANSS SPDPRRYQTD SNCIITGERD GKPIGPQAGV SWQYIYPEGL QYMLNHIKDT 420 YNNPVIYITE NGYGEVVKTD VQLHHGTVMD LPRVEYHCTH LRNVVASIKN HGVQVKGYFV 480 WSFADNFEFT DGYTIGFGLL YVNRTSNFTR IAKLSSHWFT EFLGDQPANP VPLYFKRLNI 540 A* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 8.0e-125 | 48 | 519 | 489 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 6.0e-127 | 46 | 523 | 484 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 7.0e-131 | 47 | 528 | 487 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-133 | 52 | 519 | 468 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-161 | 47 | 522 | 479 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24820.1 | 0 | 46 | 523 | 45 | 519 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277198.1 | 0 | 20 | 523 | 2 | 504 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298155.1 | 0 | 46 | 523 | 1 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298156.1 | 0 | 46 | 523 | 1 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328320.1 | 0 | 46 | 533 | 14 | 502 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 46 | 523 | 14 | 488 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 46 | 523 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 46 | 523 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 46 | 523 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 46 | 523 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |