y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra030386 |
Family | GH1 |
Protein Properties | Length: 527 Molecular Weight: 60236.2 Isoelectric Point: 7.1873 |
Chromosome | Chromosome/Scaffold: 05 Start: 10768667 End: 10771271 |
Description | beta glucosidase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 37 | 513 | 0 |
RASFPEGFLWGTATAAFQVEGAVDEGCRGPSMWDTFTKKYPHRCQNHNADVAVDFYHRYKEDIKLMRDLNTDAFRLSIAWPRIFPHGRMSKGISKQGVQF YHDLIDELLKNKITPLVTVFHWDTPQDLEDEYGGFLSGNIVKDFTEYANFTFHEYGHKVKNWITFNEPWVFSRAGYDVGKKAPGRCSPYIQEWGKHCEDG RSGFEAYQVSHNLLLAHAYSVEAFRACKQCAGGKIGIAHSPAWFEPADLESVGAPIERVLDFILGWHLHPTTYGDYPQSMKDRIGHRLPKFTEAEKRILK NSADFVGMNYYTSVFGANMQNGDSKTPSWTTDSLVQWESKTVDGYKIGSKPAGGKLDVYSRGMRKLLKYIKDNYGDPEIMITENGYGEDLGDLHNDVATG TNDHNRKYYLQRHLLSLHEAICDDKVNVTGYYVWSLMDNFEWQDGYKARFGLYYIDFLNNLTRHQKVSGKWYADFLK |
Full Sequence |
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Protein Sequence Length: 527 Download |
MVKFERVPLL LGLVLVLTLV VAKASEPVCR QAEKFSRASF PEGFLWGTAT AAFQVEGAVD 60 EGCRGPSMWD TFTKKYPHRC QNHNADVAVD FYHRYKEDIK LMRDLNTDAF RLSIAWPRIF 120 PHGRMSKGIS KQGVQFYHDL IDELLKNKIT PLVTVFHWDT PQDLEDEYGG FLSGNIVKDF 180 TEYANFTFHE YGHKVKNWIT FNEPWVFSRA GYDVGKKAPG RCSPYIQEWG KHCEDGRSGF 240 EAYQVSHNLL LAHAYSVEAF RACKQCAGGK IGIAHSPAWF EPADLESVGA PIERVLDFIL 300 GWHLHPTTYG DYPQSMKDRI GHRLPKFTEA EKRILKNSAD FVGMNYYTSV FGANMQNGDS 360 KTPSWTTDSL VQWESKTVDG YKIGSKPAGG KLDVYSRGMR KLLKYIKDNY GDPEIMITEN 420 GYGEDLGDLH NDVATGTNDH NRKYYLQRHL LSLHEAICDD KVNVTGYYVW SLMDNFEWQD 480 GYKARFGLYY IDFLNNLTRH QKVSGKWYAD FLKPGFPTSK IVREEL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 3.0e-106 | 34 | 513 | 495 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-119 | 30 | 524 | 502 | + beta-glucosidase | ||
COG2723 | BglB | 6.0e-125 | 40 | 510 | 488 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-141 | 41 | 508 | 475 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-168 | 36 | 513 | 483 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF22295.1 | 0 | 1 | 526 | 1 | 528 | AF183827_1 beta-glucosidase homolog [Arabidopsis thaliana] |
GenBank | AAN31804.1 | 0 | 1 | 526 | 1 | 528 | putative beta-glucosidase [Arabidopsis thaliana] |
EMBL | CAC19786.1 | 0 | 1 | 526 | 1 | 528 | beta-glucosidase 1 [Arabidopsis thaliana] |
RefSeq | NP_001031175.1 | 0 | 1 | 457 | 1 | 460 | BGLU18 (BETA GLUCOSIDASE 18); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_175649.1 | 0 | 1 | 526 | 1 | 528 | BGLU18 (BETA GLUCOSIDASE 18); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 36 | 512 | 30 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptq_A | 0 | 36 | 512 | 30 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptm_B | 0 | 36 | 512 | 30 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptm_A | 0 | 36 | 512 | 30 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptk_B | 0 | 36 | 512 | 30 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |