y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G094200.2 |
Family | GH1 |
Protein Properties | Length: 508 Molecular Weight: 57342.2 Isoelectric Point: 8.1823 |
Chromosome | Chromosome/Scaffold: 08 Start: 5901320 End: 5907791 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 28 | 506 | 0 |
RASFPKGFVFGTASSAFQYEGAVKEDGRGPSVWDKFSHTFGKIIDFSNADVAVDQYHHFDEDIKLMKDMGMDAYRFSISWTRIYPNGTGKINQAGVDHYN KFINALLAQGIEPYVTLFHWDLPQALHDRYNGWLSPQIIKDFATFAETCFQNYGDRVKNWITFNEPHTVSIQGYDVGLQAPGRCSILLHLFCRAGNSATE PYIVAHNMLLSHGAAADIYRKKYKAKQQGSVGISLDVIWFEPATNSTKDIEAAQRAQDFQLGWFIEPLILGDYPISMRNRVGDRLPKFTENDAALVKGSL DFVGINHYTTFYARSNDSLLGDVIGKVLNDSVADSGAITLPFGENKKPIGDRANSIWLYIVPQGMRSLMNHIRQKYGNPPVIITENGMDDPNNALTPIKD ALKDGKRIKYHNDYLTNLLASIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDKLKRYPKDSVQWFKKFLTS |
Full Sequence |
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Protein Sequence Length: 508 Download |
MLLRRGIALV IIVSVAFQIQ TCLSQINRAS FPKGFVFGTA SSAFQYEGAV KEDGRGPSVW 60 DKFSHTFGKI IDFSNADVAV DQYHHFDEDI KLMKDMGMDA YRFSISWTRI YPNGTGKINQ 120 AGVDHYNKFI NALLAQGIEP YVTLFHWDLP QALHDRYNGW LSPQIIKDFA TFAETCFQNY 180 GDRVKNWITF NEPHTVSIQG YDVGLQAPGR CSILLHLFCR AGNSATEPYI VAHNMLLSHG 240 AAADIYRKKY KAKQQGSVGI SLDVIWFEPA TNSTKDIEAA QRAQDFQLGW FIEPLILGDY 300 PISMRNRVGD RLPKFTENDA ALVKGSLDFV GINHYTTFYA RSNDSLLGDV IGKVLNDSVA 360 DSGAITLPFG ENKKPIGDRA NSIWLYIVPQ GMRSLMNHIR QKYGNPPVII TENGMDDPNN 420 ALTPIKDALK DGKRIKYHND YLTNLLASIK EDGCNVKGYF VWSLLDNWEW AAGYTSRFGL 480 YFVDYKDKLK RYPKDSVQWF KKFLTSS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 3.0e-150 | 2 | 507 | 507 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 2.0e-154 | 9 | 504 | 504 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-154 | 7 | 507 | 504 | + beta-glucosidase | ||
TIGR03356 | BGL | 8.0e-167 | 32 | 500 | 472 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 27 | 506 | 483 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27264.1 | 0 | 1 | 506 | 61 | 564 | unnamed protein product [Vitis vinifera] |
EMBL | CBI27265.1 | 0 | 1 | 506 | 23 | 525 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002311330.1 | 0 | 1 | 507 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316096.1 | 0 | 2 | 507 | 2 | 509 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512097.1 | 0 | 18 | 507 | 18 | 504 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 26 | 506 | 12 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gnp_A | 0 | 26 | 506 | 12 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gno_A | 0 | 26 | 506 | 12 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 26 | 504 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 26 | 504 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |