y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G088100.2 |
Family | GH1 |
Protein Properties | Length: 478 Molecular Weight: 54709.5 Isoelectric Point: 5.629 |
Chromosome | Chromosome/Scaffold: 03 Start: 23914150 End: 23934708 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 18 | 467 | 0 |
KADFPPNFVFGVATAAYQIEGACNEGSRGASIWDSFSHTEVDHYHRYKEDVNLIHKFGFDAYRFSISWSRIFPDGVGTKVNEEGIAFYNNLINALIEKGI QPFITLYHWDLPLHLQETIGGWLDKQIVNYFAIYADTCFAHFGDRVKNWITINEPLQTAVNGYDTGIFAPGRREGSSEEPYLAAHHQILAHATAGSIYRS KYKDKQGGQIGLVLDCEWAEANSDKIEDKSAASRRLDFQLGWYLCPLYYGDYPAVMLERLGDRLPKFSEEEKKLLLNSLDFLGLNHYTSRFISHATSCSE ESYFYKAQEMERIVEWEGGEKIGEKAASEWLYIVPWGLRKVLNYIARKYNNPPIYITENGMDDEEDNSLPLSEILDDKLRVHYFKGYLAAVAQAIKDGAD VRGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNSLTRHPKSSAYWFSRFLK |
Full Sequence |
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Protein Sequence Length: 478 Download |
MAKKELFKEN GEGEEVCKAD FPPNFVFGVA TAAYQIEGAC NEGSRGASIW DSFSHTEVDH 60 YHRYKEDVNL IHKFGFDAYR FSISWSRIFP DGVGTKVNEE GIAFYNNLIN ALIEKGIQPF 120 ITLYHWDLPL HLQETIGGWL DKQIVNYFAI YADTCFAHFG DRVKNWITIN EPLQTAVNGY 180 DTGIFAPGRR EGSSEEPYLA AHHQILAHAT AGSIYRSKYK DKQGGQIGLV LDCEWAEANS 240 DKIEDKSAAS RRLDFQLGWY LCPLYYGDYP AVMLERLGDR LPKFSEEEKK LLLNSLDFLG 300 LNHYTSRFIS HATSCSEESY FYKAQEMERI VEWEGGEKIG EKAASEWLYI VPWGLRKVLN 360 YIARKYNNPP IYITENGMDD EEDNSLPLSE ILDDKLRVHY FKGYLAAVAQ AIKDGADVRG 420 YFAWSLLDNF EWAQGYTKRF GLVYVDYKNS LTRHPKSSAY WFSRFLKGGE KKNGKEN* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 2.0e-120 | 18 | 466 | 470 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 9.0e-121 | 18 | 466 | 474 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-133 | 21 | 462 | 462 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-167 | 22 | 462 | 455 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-173 | 21 | 465 | 462 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 1 | 476 | 1 | 489 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 1 | 477 | 2 | 493 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_198505.2 | 0 | 18 | 476 | 18 | 489 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270406.1 | 0 | 16 | 476 | 555 | 1026 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514775.1 | 0 | 2 | 476 | 4 | 499 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 12 | 467 | 8 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gnp_A | 0 | 12 | 467 | 8 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gno_A | 0 | 12 | 467 | 8 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 16 | 467 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 16 | 467 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO129960 | 280 | 187 | 466 | 0 |
GR709768 | 278 | 1 | 266 | 0 |
CO112186 | 269 | 176 | 444 | 0 |
FP028268 | 290 | 58 | 347 | 0 |
HE645214 | 348 | 38 | 366 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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