y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra024709 |
Family | GH1 |
Protein Properties | Length: 509 Molecular Weight: 57718.5 Isoelectric Point: 7.6451 |
Chromosome | Chromosome/Scaffold: 09 Start: 23396062 End: 23399123 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 33 | 506 | 0 |
GSFPKGFVFGTASSAFQHEGAVKEEGRGPTIWDTFSHAFGKITDFSNADIAVDQYHRYEEDVQLMKNMGMDAYRFSISWARIFPNGVGQINEAGIDHYNK LINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQIINDFAAYAEVCFQRFGDRVKHWITFNEPHTFAIQGYDVGLQAPGRCTILFKLTCRSGNSSTEP YIVGHNVLLTHATVSDIYRKKYKAKQGGSLGIAFDVMWYEPESNKTEDIEAAQRAQDFQLGWFLDPLMFGDYPSSMRSRVGSRLPVFTGSQSALMKGSLD FVGINHYTTYYARNNDTNLIGTLLHDAVSDSGTVTLPFKGLNAIGDRASSIWLYIVPRGMRSLMNYVKQRYGNPPVFITENGMDDSNNVLISREEALKDA KRIKYHHDYLSSLQAAIKEDGCNVKGYFAWSLLDNWEWAAGYSSRFGLYFVDYRDKLKRYPKDSVRWFTSFLNS |
Full Sequence |
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Protein Sequence Length: 509 Download |
MGSRRLIMVM GMVMVVVMMM DTRCVCAQDI SRGSFPKGFV FGTASSAFQH EGAVKEEGRG 60 PTIWDTFSHA FGKITDFSNA DIAVDQYHRY EEDVQLMKNM GMDAYRFSIS WARIFPNGVG 120 QINEAGIDHY NKLINALLAK GIEPYVTLYH WDLPQALHDR YLGWLNPQII NDFAAYAEVC 180 FQRFGDRVKH WITFNEPHTF AIQGYDVGLQ APGRCTILFK LTCRSGNSST EPYIVGHNVL 240 LTHATVSDIY RKKYKAKQGG SLGIAFDVMW YEPESNKTED IEAAQRAQDF QLGWFLDPLM 300 FGDYPSSMRS RVGSRLPVFT GSQSALMKGS LDFVGINHYT TYYARNNDTN LIGTLLHDAV 360 SDSGTVTLPF KGLNAIGDRA SSIWLYIVPR GMRSLMNYVK QRYGNPPVFI TENGMDDSNN 420 VLISREEALK DAKRIKYHHD YLSSLQAAIK EDGCNVKGYF AWSLLDNWEW AAGYSSRFGL 480 YFVDYRDKLK RYPKDSVRWF TSFLNSTS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 3.0e-153 | 31 | 507 | 478 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-162 | 31 | 507 | 479 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 5.0e-163 | 26 | 508 | 484 | + beta-glucosidase | ||
TIGR03356 | BGL | 7.0e-166 | 36 | 500 | 466 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 31 | 507 | 481 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61600.1 | 0 | 21 | 508 | 12 | 498 | beta-glucosidase, putative [Arabidopsis thaliana] |
EMBL | CBI27264.1 | 0 | 10 | 506 | 67 | 564 | unnamed protein product [Vitis vinifera] |
EMBL | CBI27265.1 | 0 | 12 | 506 | 31 | 525 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_173978.1 | 0 | 1 | 508 | 1 | 510 | BGLU40 (BETA GLUCOSIDASE 40); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002274662.1 | 0 | 10 | 506 | 7 | 504 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 30 | 506 | 12 | 488 | A Chain A, Crystal Structure Of Putative Oxygenase (Yp_001051978.1) From Shewanella Baltica Os155 At 2.26 A Resolution |
PDB | 3gnp_A | 0 | 30 | 506 | 12 | 488 | A Chain A, Crystal Structure Of Putative Oxygenase (Yp_001051978.1) From Shewanella Baltica Os155 At 2.26 A Resolution |
PDB | 3gno_A | 0 | 30 | 506 | 12 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 30 | 504 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 30 | 504 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |