y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10008883m |
Family | GH1 |
Protein Properties | Length: 513 Molecular Weight: 58191.4 Isoelectric Point: 8.3123 |
Chromosome | Chromosome/Scaffold: 1 Start: 8800632 End: 8804167 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 37 | 510 | 0 |
GSFPKGFVFGTASSAFQHEGAVKADGRGPTIWDTFSHTFGKITDFSNADVAVDQYHRYEEDVQLMKNMGMDAYRFSISWTRIFPNGVGQINEAGIDHYNK LIDALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQIINDFAAYAEVCFQRFGDRVKHWITFNEPHTFAIQGYDVGLQAPGRCTILFKLTCRSGNSSTEP YIVGHNVILTHATVSDLYKKKYKAKQGGSLGIAFDVMWFEPESNKTEDIEAAQRAQDFQLGWFLDPLMFGDYPSSMRSRVGSRLPVFTKSQSALVKGSLD FVGINHYTTYYARNNATNLIGTLLHDAISDSGTVTLPFKGLSAIGDRASSIWLYIVPRGMRSLMNYVKQRYGNPPVFITENGMDDANNFLISRKDALKDS KRIKYHHDYLSSLQASIKEDGCNVKGYFVWSLLDNWEWAAGYSSRFGLYFVDYRDNLKRYPKDSVQWFTSFLNS |
Full Sequence |
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Protein Sequence Length: 513 Download |
MAPRGSIMMI TKMMMMMIVM MMMIDKKTCI CADISRGSFP KGFVFGTASS AFQHEGAVKA 60 DGRGPTIWDT FSHTFGKITD FSNADVAVDQ YHRYEEDVQL MKNMGMDAYR FSISWTRIFP 120 NGVGQINEAG IDHYNKLIDA LLAKGIEPYV TLYHWDLPQA LHDRYLGWLN PQIINDFAAY 180 AEVCFQRFGD RVKHWITFNE PHTFAIQGYD VGLQAPGRCT ILFKLTCRSG NSSTEPYIVG 240 HNVILTHATV SDLYKKKYKA KQGGSLGIAF DVMWFEPESN KTEDIEAAQR AQDFQLGWFL 300 DPLMFGDYPS SMRSRVGSRL PVFTKSQSAL VKGSLDFVGI NHYTTYYARN NATNLIGTLL 360 HDAISDSGTV TLPFKGLSAI GDRASSIWLY IVPRGMRSLM NYVKQRYGNP PVFITENGMD 420 DANNFLISRK DALKDSKRIK YHHDYLSSLQ ASIKEDGCNV KGYFVWSLLD NWEWAAGYSS 480 RFGLYFVDYR DNLKRYPKDS VQWFTSFLNS TS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 8.0e-155 | 35 | 511 | 478 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 2.0e-163 | 32 | 512 | 482 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-164 | 28 | 511 | 486 | + beta-glucosidase | ||
TIGR03356 | BGL | 1.0e-167 | 40 | 504 | 469 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 35 | 511 | 480 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61600.1 | 0 | 27 | 512 | 13 | 498 | beta-glucosidase, putative [Arabidopsis thaliana] |
EMBL | CBI27264.1 | 0 | 1 | 510 | 54 | 564 | unnamed protein product [Vitis vinifera] |
EMBL | CBI27265.1 | 0 | 8 | 510 | 23 | 525 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_173978.1 | 0 | 27 | 512 | 25 | 510 | BGLU40 (BETA GLUCOSIDASE 40); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002274662.1 | 0 | 8 | 510 | 1 | 504 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 34 | 510 | 12 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3gnp_A | 0 | 34 | 510 | 12 | 488 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3gno_A | 0 | 34 | 510 | 12 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 34 | 508 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 34 | 508 | 29 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |