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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048764m |
Family | GH1 |
Protein Properties | Length: 322 Molecular Weight: 36358 Isoelectric Point: 6.4336 |
Chromosome | Chromosome/Scaffold: 0165205 Start: 263 End: 2366 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 8 | 286 | 0 |
VGKISDFSNADVAVDQYHRFQEDVQLMADMGMDAYRFSIAWSRILPNGTGQVNQAGIDHYNKVTDTLVSKGIQPYVTLYHWDLPQALEDRYNGWLDRQIV DDFAAYAETCFKAFGDRVKHWITLNEPHTVAIQGYDAGLHAPGRCSVLLHLYCKSGNSGTEPYIVAHNFILAHATVSDIYRRKYKATQNGQLGIAFDVIW YEPMTNSTIDIEATKRAQEFQLGWFADPFFFGDYPATMRKRVAERLPKFTADESALVKGALDFMGINHYTTFYTRHNET |
Full Sequence |
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Protein Sequence Length: 322 Download |
GFSFLQFVGK ISDFSNADVA VDQYHRFQED VQLMADMGMD AYRFSIAWSR ILPNGTGQVN 60 QAGIDHYNKV TDTLVSKGIQ PYVTLYHWDL PQALEDRYNG WLDRQIVDDF AAYAETCFKA 120 FGDRVKHWIT LNEPHTVAIQ GYDAGLHAPG RCSVLLHLYC KSGNSGTEPY IVAHNFILAH 180 ATVSDIYRRK YKATQNGQLG IAFDVIWYEP MTNSTIDIEA TKRAQEFQLG WFADPFFFGD 240 YPATMRKRVA ERLPKFTADE SALVKGALDF MGINHYTTFY TRHNETNIIG RLLNDTLADT 300 GTISLRFCLA SPVGKDLLSR T* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03356 | BGL | 8.0e-102 | 9 | 291 | 283 | + beta-galactosidase. | ||
PLN02814 | PLN02814 | 4.0e-103 | 15 | 280 | 266 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 2.0e-103 | 13 | 278 | 266 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 9.0e-106 | 12 | 288 | 277 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 8.0e-116 | 4 | 290 | 290 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3GNO | 0 | 3 | 314 | 48 | 359 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase |
GenBank | EEC74750.1 | 0 | 3 | 314 | 81 | 392 | hypothetical protein OsI_10506 [Oryza sativa Indica Group] |
RefSeq | NP_001049358.1 | 0 | 3 | 314 | 81 | 392 | Os03g0212800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131592.1 | 0 | 9 | 306 | 32 | 329 | hypothetical protein LOC100192939 [Zea mays] |
RefSeq | XP_002465651.1 | 0 | 3 | 314 | 66 | 378 | hypothetical protein SORBIDRAFT_01g043030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 3 | 314 | 48 | 359 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 3gnp_A | 0 | 3 | 314 | 48 | 359 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 3gno_A | 0 | 3 | 314 | 48 | 359 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 6 | 280 | 69 | 345 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 6 | 280 | 69 | 345 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO467354 | 280 | 23 | 302 | 0 |
CD445171 | 252 | 22 | 273 | 0 |
CB673495 | 239 | 3 | 241 | 0 |
EH773902 | 276 | 30 | 305 | 0 |
DR808423 | 214 | 93 | 306 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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