Genome Details
Selected Rep_genome_ID: ShaoY_2019_ERR3405828_bin.1
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Granulicatella
Species
Granulicatella sp001058355
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| ShaoY_2019_ERR3405828_bin.1 | 1,800,690 | 99.45% | 0.273% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| ShaoY_2019_ERR3405828_bin.1_CGC10 | CGCFAM_00012 | Yes | 6 | 1 | host glycan/beta-glucan |
| ShaoY_2019_ERR3405828_bin.1_CGC12 | CGCFAM_00014 | Yes | 5 | 1 | host glycan |
| ShaoY_2019_ERR3405828_bin.1_CGC2 | CGCFAM_02653 | Yes | 3 | 1 | |
| ShaoY_2019_ERR3405828_bin.1_CGC18 | CGCFAM_06005 | Yes | 8 | 1 |
Top CAZyme Families