Genome Details
Selected Rep_genome_ID: ShaoY_2019_ERR3404980_bin.1
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541745
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0987 | 2,166,975 | 99.19% | 0.806% | Italy | Europe | HRGM |
| Rep_2814 | 2,161,202 | 100% | 0.806452% | NA | NA | WIS |
| ShaoY_2019_ERR3404980_bin.1 | 2,201,202 | 100% | 0.806% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| ShaoY_2019_ERR3404980_bin.1_CGC3 | CGCFAM_00011 | Yes | 10 | 6 | |
| ShaoY_2019_ERR3404980_bin.1_CGC17 | CGCFAM_00467 | Yes | 5 | 1 |
Top CAZyme Families