Genome Details
Selected Rep_genome_ID: SW145_bin.18
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus equicursoris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| SW145_bin.18 | 1,887,095 | 97.04% | 0.16% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW145_bin.18_CGC19 | CGCFAM_00012 | Yes | 7 | 3 | host glycan/beta-glucan |
| SW145_bin.18_CGC13 | CGCFAM_00020 | Yes | 8 | 3 | host glycan/beta-glucan |
| SW145_bin.18_CGC20 | CGCFAM_00040 | Yes | 7 | 4 | |
| SW145_bin.18_CGC8 | CGCFAM_00066 | Yes | 5 | 1 | beta-mannan |
| SW145_bin.18_CGC16 | CGCFAM_00102 | Yes | 8 | 1 | |
| SW145_bin.18_CGC18 | CGCFAM_00131 | Yes | 5 | 1 | |
| SW145_bin.18_CGC9 | CGCFAM_00336 | Yes | 15 | 6 | alpha-glucan |
| SW145_bin.18_CGC11 | CGCFAM_03032 | Yes | 4 | 3 | |
| SW145_bin.18_CGC3 | CGCFAM_03744 | Yes | 11 | 5 | |
| SW145_bin.18_CGC15 | CGCFAM_05343 | Yes | 4 | 1 |
Top CAZyme Families