Cluster: SW145_bin.18_CGC9
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate: alpha-glucan
- Genome ID: SW145_bin.18
- CGC Family ID: CGCFAM_00336
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_119530 | k141_119530_10 | 7295 | 8449 | - | CE9 |
| CAZyme | k141_119530 | k141_119530_11 | 8646 | 11636 | + | GH31_18 |
| TC | k141_119530 | k141_119530_12 | 11732 | 12589 | - | 3.A.1.1.27 |
| TC | k141_119530 | k141_119530_13 | 12592 | 13950 | - | 3.A.1.1.27 |
| TC | k141_119530 | k141_119530_14 | 13998 | 15218 | - | 3.A.1.1.26 |
| TC | k141_119530 | k141_119530_15 | 15302 | 16408 | - | 3.A.1.1.20 |
| pfam | k141_119530 | k141_119530_16 | 16419 | 17087 | - | Hydrolase | HAD_2 |
| CAZyme | k141_119530 | k141_119530_17 | 17072 | 19345 | - | GH65 |
| CAZyme | k141_119530 | k141_119530_18 | 19439 | 21142 | - | CBM34 | GH13_20 |
| CAZyme | k141_119530 | k141_119530_19 | 21203 | 22864 | - | GH13_31 |
| TF | k141_119530 | k141_119530_20 | 22986 | 23945 | - | LacI |
| CAZyme | k141_119530 | k141_119530_21 | 24099 | 25718 | - | GH13_31 |
| peptidase | k141_119530 | k141_119530_22 | 25949 | 26821 | - | S09.UPW |
| TC | k141_119530 | k141_119530_23 | 26787 | 27584 | - | 9.B.141.1.2 |
| TC | k141_119530 | k141_119530_24 | 27581 | 28723 | - | 9.B.141.1.3 |
Gene ID: k141_119530_10
Type: CAZyme
Location: 7295 - 8449 (-)
Type: CAZyme
Location: 7295 - 8449 (-)
Gene ID: k141_119530_11
Type: CAZyme
Location: 8646 - 11636 (+)
Type: CAZyme
Location: 8646 - 11636 (+)
Gene ID: k141_119530_12
Type: TC
Location: 11732 - 12589 (-)
Type: TC
Location: 11732 - 12589 (-)
Gene ID: k141_119530_13
Type: TC
Location: 12592 - 13950 (-)
Type: TC
Location: 12592 - 13950 (-)
Gene ID: k141_119530_14
Type: TC
Location: 13998 - 15218 (-)
Type: TC
Location: 13998 - 15218 (-)
Gene ID: k141_119530_15
Type: TC
Location: 15302 - 16408 (-)
Type: TC
Location: 15302 - 16408 (-)
Gene ID: k141_119530_16
Type: pfam
Location: 16419 - 17087 (-)
Type: pfam
Location: 16419 - 17087 (-)
Gene ID: k141_119530_17
Type: CAZyme
Location: 17072 - 19345 (-)
Type: CAZyme
Location: 17072 - 19345 (-)
Gene ID: k141_119530_18
Type: CAZyme
Location: 19439 - 21142 (-)
Type: CAZyme
Location: 19439 - 21142 (-)
Gene ID: k141_119530_19
Type: CAZyme
Location: 21203 - 22864 (-)
Type: CAZyme
Location: 21203 - 22864 (-)
Gene ID: k141_119530_20
Type: TF
Location: 22986 - 23945 (-)
Type: TF
Location: 22986 - 23945 (-)
Gene ID: k141_119530_21
Type: CAZyme
Location: 24099 - 25718 (-)
Type: CAZyme
Location: 24099 - 25718 (-)
Gene ID: k141_119530_22
Type: peptidase
Location: 25949 - 26821 (-)
Type: peptidase
Location: 25949 - 26821 (-)
Gene ID: k141_119530_23
Type: TC
Location: 26787 - 27584 (-)
Type: TC
Location: 26787 - 27584 (-)
Gene ID: k141_119530_24
Type: TC
Location: 27581 - 28723 (-)
Type: TC
Location: 27581 - 28723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus equicursoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.