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Cluster: SW145_bin.18_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_100817 k141_100817_24 24678 26135 - GH32
TC k141_100817 k141_100817_25 26394 28331 + 4.A.1.2.12
pfam k141_100817 k141_100817_26 28496 29575 + PFK
pfam k141_100817 k141_100817_27 29708 31429 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_100817 k141_100817_28 31451 33244 - GH13_39
CAZyme k141_100817 k141_100817_29 33247 35688 - GT35
CAZyme k141_100817 k141_100817_30 35710 37140 - GT5
pfam k141_100817 k141_100817_31 37156 38298 - NTP_transferase | Hexapep_GlmU
pfam k141_100817 k141_100817_32 38285 39433 - Hexapep | NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_100817 k141_100817_33 39482 41398 - CBM48 | GH13_9
TC k141_100817 k141_100817_34 41858 42256 - 9.B.143.3.6
Gene ID: k141_100817_24
Type: CAZyme
Location: 24678 - 26135 (-)
Gene ID: k141_100817_25
Type: TC
Location: 26394 - 28331 (+)
Gene ID: k141_100817_26
Type: pfam
Location: 28496 - 29575 (+)
Gene ID: k141_100817_27
Type: pfam
Location: 29708 - 31429 (-)
Gene ID: k141_100817_28
Type: CAZyme
Location: 31451 - 33244 (-)
Gene ID: k141_100817_29
Type: CAZyme
Location: 33247 - 35688 (-)
Gene ID: k141_100817_30
Type: CAZyme
Location: 35710 - 37140 (-)
Gene ID: k141_100817_31
Type: pfam
Location: 37156 - 38298 (-)
Gene ID: k141_100817_32
Type: pfam
Location: 38285 - 39433 (-)
Gene ID: k141_100817_33
Type: CAZyme
Location: 39482 - 41398 (-)
Gene ID: k141_100817_34
Type: TC
Location: 41858 - 42256 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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