Genome Details
Selected Rep_genome_ID: SW141_bin.60
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus petauri
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR018763 | 1,935,961 | 99.24% | 0% | China | Asia | CGMR |
| CGMR031853 | 1,877,308 | 98.4% | 0.08% | China | Asia | CGMR |
| HRGMv2_2473 | 1,943,916 | 100% | 0% | Japan | Asia | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_A_20_1823.145 | 2,133,040 | 100% | 0% | NA | Africa | Hadza |
| SW141_bin.60 | 2,030,753 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW141_bin.60_CGC2 | CGCFAM_00094 | Yes | 5 | 1 | beta-mannan/fructan |
| SW141_bin.60_CGC5 | CGCFAM_00200 | Yes | 10 | 1 | |
| SW141_bin.60_CGC21 | CGCFAM_02002 | Yes | 7 | 1 | |
| SW141_bin.60_CGC30 | CGCFAM_02280 | Yes | 12 | 3 | |
| SW141_bin.60_CGC18 | CGCFAM_03887 | Yes | 25 | 4 | |
| SW141_bin.60_CGC24 | CGCFAM_04226 | Yes | 5 | 1 | |
| SW141_bin.60_CGC3 | CGCFAM_08857 | Yes | 13 | 1 | |
| SW141_bin.60_CGC28 | CGCFAM_08860 | Yes | 10 | 1 |
Top CAZyme Families