Cluster: SW141_bin.60_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: SW141_bin.60
- CGC Family ID: CGCFAM_08857
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_174172 | k141_174172_102 | 112474 | 114030 | + | 3.A.1.121.4 |
| TC | k141_174172 | k141_174172_103 | 114196 | 115371 | + | 2.A.45.2.6 |
| TC | k141_174172 | k141_174172_104 | 115429 | 116073 | + | 3.A.11.1.2 |
| TC | k141_174172 | k141_174172_105 | 116344 | 116760 | + | 3.A.11.1.2 |
| TC | k141_174172 | k141_174172_106 | 117053 | 118309 | + | 3.A.11.1.2 |
| CAZyme | k141_174172 | k141_174172_107 | 118464 | 119240 | + | CE1 |
| pfam | k141_174172 | k141_174172_108 | 119436 | 119651 | + | ATP-synt_C |
| TC | k141_174172 | k141_174172_109 | 119706 | 120419 | + | 3.A.2.1.2 |
| pfam | k141_174172 | k141_174172_110 | 120433 | 120939 | + | ATP-synt_B |
| pfam | k141_174172 | k141_174172_111 | 120954 | 121481 | + | OSCP |
| TC | k141_174172 | k141_174172_112 | 121547 | 123055 | + | 3.A.2.1.2 |
| TC | k141_174172 | k141_174172_113 | 123067 | 123948 | + | 3.A.2.1.5 |
| TC | k141_174172 | k141_174172_114 | 124008 | 125417 | + | 3.A.2.1.5 |
Gene ID: k141_174172_102
Type: TC
Location: 112474 - 114030 (+)
Type: TC
Location: 112474 - 114030 (+)
Gene ID: k141_174172_103
Type: TC
Location: 114196 - 115371 (+)
Type: TC
Location: 114196 - 115371 (+)
Gene ID: k141_174172_104
Type: TC
Location: 115429 - 116073 (+)
Type: TC
Location: 115429 - 116073 (+)
Gene ID: k141_174172_105
Type: TC
Location: 116344 - 116760 (+)
Type: TC
Location: 116344 - 116760 (+)
Gene ID: k141_174172_106
Type: TC
Location: 117053 - 118309 (+)
Type: TC
Location: 117053 - 118309 (+)
Gene ID: k141_174172_107
Type: CAZyme
Location: 118464 - 119240 (+)
Type: CAZyme
Location: 118464 - 119240 (+)
Gene ID: k141_174172_108
Type: pfam
Location: 119436 - 119651 (+)
Type: pfam
Location: 119436 - 119651 (+)
Gene ID: k141_174172_109
Type: TC
Location: 119706 - 120419 (+)
Type: TC
Location: 119706 - 120419 (+)
Gene ID: k141_174172_110
Type: pfam
Location: 120433 - 120939 (+)
Type: pfam
Location: 120433 - 120939 (+)
Gene ID: k141_174172_111
Type: pfam
Location: 120954 - 121481 (+)
Type: pfam
Location: 120954 - 121481 (+)
Gene ID: k141_174172_112
Type: TC
Location: 121547 - 123055 (+)
Type: TC
Location: 121547 - 123055 (+)
Gene ID: k141_174172_113
Type: TC
Location: 123067 - 123948 (+)
Type: TC
Location: 123067 - 123948 (+)
Gene ID: k141_174172_114
Type: TC
Location: 124008 - 125417 (+)
Type: TC
Location: 124008 - 125417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus petauri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.