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Cluster: SW141_bin.60_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_145956 k141_145956_202 211098 212531 - GH1
CAZyme k141_145956 k141_145956_203 212653 213825 - GH18
CAZyme k141_145956 k141_145956_204 213861 215141 - GH125
CAZyme k141_145956 k141_145956_205 215158 217782 - GH38
TC k141_145956 k141_145956_206 217813 219153 - 4.A.3.2.8
TF k141_145956 k141_145956_207 219331 220044 + GntR
TF k141_145956 k141_145956_208 220193 220888 + Fe_dep_repress
TC k141_145956 k141_145956_209 220960 222516 + 2.A.55.2.6
pfam k141_145956 k141_145956_210 222552 223250 - AIM24
NULL(UNKNOWN) k141_145956 k141_145956_211 223346 223861 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_145956 k141_145956_212 223992 225941 - 2.A.36.3.2
pfam k141_145956 k141_145956_213 226054 226785 - Ubie_methyltran | TehB | PrmA | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC k141_145956 k141_145956_214 226914 228131 - 2.A.1.2.5
pfam k141_145956 k141_145956_215 228241 228657 - NDK
TC k141_145956 k141_145956_216 228799 231402 - 3.A.9.1.2
pfam k141_145956 k141_145956_217 231562 232191 - NAD_binding_10
TF k141_145956 k141_145956_218 232280 232720 - Rrf2
TC k141_145956 k141_145956_219 232866 233396 + 9.B.36.1.3
TC k141_145956 k141_145956_220 233453 234610 - 2.A.1.2.8
pfam k141_145956 k141_145956_221 234812 237073 - GARS_A | Glu_cys_ligase | ATP-grasp_6
pfam k141_145956 k141_145956_222 237183 237629 - OsmC
TC k141_145956 k141_145956_223 237770 238618 + 3.A.1.3.13
pfam k141_145956 k141_145956_224 238605 240080 + Amidase
pfam k141_145956 k141_145956_225 240117 240536 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC k141_145956 k141_145956_226 240638 241213 - 1.A.78.2.6
Gene ID: k141_145956_202
Type: CAZyme
Location: 211098 - 212531 (-)
Gene ID: k141_145956_203
Type: CAZyme
Location: 212653 - 213825 (-)
Gene ID: k141_145956_204
Type: CAZyme
Location: 213861 - 215141 (-)
Gene ID: k141_145956_205
Type: CAZyme
Location: 215158 - 217782 (-)
Gene ID: k141_145956_206
Type: TC
Location: 217813 - 219153 (-)
Gene ID: k141_145956_207
Type: TF
Location: 219331 - 220044 (+)
Gene ID: k141_145956_208
Type: TF
Location: 220193 - 220888 (+)
Gene ID: k141_145956_209
Type: TC
Location: 220960 - 222516 (+)
Gene ID: k141_145956_210
Type: pfam
Location: 222552 - 223250 (-)
Gene ID: k141_145956_211
Type:
Location: 223346 - 223861 (-)
Gene ID: k141_145956_212
Type: TC
Location: 223992 - 225941 (-)
Gene ID: k141_145956_213
Type: pfam
Location: 226054 - 226785 (-)
Gene ID: k141_145956_214
Type: TC
Location: 226914 - 228131 (-)
Gene ID: k141_145956_215
Type: pfam
Location: 228241 - 228657 (-)
Gene ID: k141_145956_216
Type: TC
Location: 228799 - 231402 (-)
Gene ID: k141_145956_217
Type: pfam
Location: 231562 - 232191 (-)
Gene ID: k141_145956_218
Type: TF
Location: 232280 - 232720 (-)
Gene ID: k141_145956_219
Type: TC
Location: 232866 - 233396 (+)
Gene ID: k141_145956_220
Type: TC
Location: 233453 - 234610 (-)
Gene ID: k141_145956_221
Type: pfam
Location: 234812 - 237073 (-)
Gene ID: k141_145956_222
Type: pfam
Location: 237183 - 237629 (-)
Gene ID: k141_145956_223
Type: TC
Location: 237770 - 238618 (+)
Gene ID: k141_145956_224
Type: pfam
Location: 238605 - 240080 (+)
Gene ID: k141_145956_225
Type: pfam
Location: 240117 - 240536 (-)
Gene ID: k141_145956_226
Type: TC
Location: 240638 - 241213 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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