Genome Details
Selected Rep_genome_ID: SW130_59_sub
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus fermentans_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR072899 | 2,316,684 | 92.81% | 1.2% | China | Asia | CGMR |
| HRGMv2_3804 | 2,358,102 | 97.65% | 2.17% | South Korea | Asia | HRGM |
| MGYG000004805 | 2,557,512 | 100% | 1.31% | China | Asia | UHGG |
| SW130_59_sub | 2,320,149 | 100% | 0.6% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW130_59_sub_CGC8 | CGCFAM_01184 | Yes | 4 | 2 | |
| SW130_59_sub_CGC3 | CGCFAM_01667 | Yes | 8 | 1 | |
| SW130_59_sub_CGC7 | CGCFAM_02047 | Yes | 4 | 2 | |
| SW130_59_sub_CGC4 | CGCFAM_04633 | Yes | 7 | 2 | |
| SW130_59_sub_CGC1 | CGCFAM_05935 | Yes | 15 | 2 | |
| SW130_59_sub_CGC9 | CGCFAM_09481 | Yes | 16 | 1 |
Top CAZyme Families